PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX77094.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 547aa MW: 60167.7 Da PI: 7.5671

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX77094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00074	442	464	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H RDX77094.1 442 HECPICLKVFPSGQALGGHKRSH 464 79*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MEEDQEVKHV CKFCSKSFPC GRSLGGHMRS HVSNNVSTEA EKLSSFNGGG DMGTGSEGGA 60 NNGGGGYGLR ENPKKTWRFT DSSEDTTLVL DKLCKECGKG FHSWKALFGH MKCHSERVSQ 120 NNSLLEDQDS WNDNVNASQK MMLDDSHSDN EATAPNRRRR SKRRRTRYLA PSTSSVSFVS 180 EAEQEQEEVA MSLIMLSRDV TPWCGLNSLP HNNSLHFESP SLASKVEGKR VVSNCSEMPK 240 KVTKPRDMKW EFGNLDASNL NSKGKISSEL LGAESPESGF GVNKTMNGKK DKKPELDSSS 300 AFEDNGTDEN SNNKYTSIKA KFLDSELKSS SLKRWVSNKA PEGELSKSSN KRGKFECTTC 360 KKIFHSYQAL GGHRASHKKI KGCFASRNES SENSTELEAD LSPDPTTESK LLKNEYMEEY 420 EMVSVTTTEA DTVRESKKGK GHECPICLKV FPSGQALGGH KRSHHLAGGS ESARNCQSQT 480 VVLEGAAPEI RDFFDLNLPA STEEEGNSHG HAEPYRPWWV VGGSHKQEAL GQQHGAAYKT 540 ALVGSAR

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MEEDQEVKHV CKFCSKSFPC GRSLGGHMRS HVSNNVSTEA EKLSSFNGGG DMGTGSEGGA  60
NNGGGGYGLR ENPKKTWRFT DSSEDTTLVL DKLCKECGKG FHSWKALFGH MKCHSERVSQ  120
NNSLLEDQDS WNDNVNASQK MMLDDSHSDN EATAPNRRRR SKRRRTRYLA PSTSSVSFVS  180
EAEQEQEEVA MSLIMLSRDV TPWCGLNSLP HNNSLHFESP SLASKVEGKR VVSNCSEMPK  240
KVTKPRDMKW EFGNLDASNL NSKGKISSEL LGAESPESGF GVNKTMNGKK DKKPELDSSS  300
AFEDNGTDEN SNNKYTSIKA KFLDSELKSS SLKRWVSNKA PEGELSKSSN KRGKFECTTC  360
KKIFHSYQAL GGHRASHKKI KGCFASRNES SENSTELEAD LSPDPTTESK LLKNEYMEEY  420
EMVSVTTTEA DTVRESKKGK GHECPICLKV FPSGQALGGH KRSHHLAGGS ESARNCQSQT  480
VVLEGAAPEI RDFFDLNLPA STEEEGNSHG HAEPYRPWWV VGGSHKQEAL GQQHGAAYKT  540
ALVGSAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	3e-39	C2H2 family protein