PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX73352.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 1129aa MW: 126177 Da PI: 6.4353

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX73352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	1e-22	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l RDX73352.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEKQQL 220 99***************************954.4444.48**********************************************..5578888 PP EEEEE-S CS B3 93 vvkvfrk 99 ++++ r+ RDX73352.1 221 LLGIKRA 227 9988775 PP
2	Auxin_resp	123.7	1.3e-40	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m+fete+s rr++Gt++g+sdldp rW+nS+Wr+L+ RDX73352.1 252 AAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPARWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1129 aa Download sequence
MKAPPNGYLP NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 ADFIPSYPNL PSKLICMLHN VALHADTETD EVYAQMTLQP VNKYDKEAIL ASDMGLKQNQ 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDNTWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIKRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKALYNQV SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPARWKNSQW RNLQVGWDES TAGERPSRVS IWDIEPVVTP 360 FYICPPPFFR PKFPKQPGMP DDESDIENAF KRAMPWLGDD LGMKDASSSI FPGLSLVQWM 420 SMQQNNQFSA PPSGFVPPSM LSSNTMHGNL NTDDPSKLLS FQAPALSAPS LQFNKPNLPN 480 QVNQMQQSPT SWPPQQQQQQ KLQPMLQTPL NQLQQQQQQQ QQRQQQLPGP QNLPQPQQQQ 540 PQMPQQRAQQ PQQQQQQSCQ QTIMNNGLNG AVASNQIPNQ CVQQPVTYSQ LQQQQLLSGS 600 IPPQQSFQSP NKNTLLMTSL PQDSQFQQQI DQQASLLQRQ QQQQQQTQLQ PSPLHLLQQS 660 LSQRAPQQPQ MTQMSQQNSS EQQPQLQLLQ KLQQQQLQQQ QQQQQLLTTS SPLLQSQLLQ 720 QQNTHQQNQQ LLQLPLSQCH QSQQLGNNAF SMEKLINGNN YSSSALMQTQ QLPVNQPHNT 780 QKSLTNTRAP STLTDGDAPS CSTSPSTNNC QISPPNLMKR NQQVPATLGG PSVVEPTNHL 840 IQELQSKSEM QIKHELPGVR GPDQLKYKGA IADQLEASSG TSYCIDPNNI HQNFQIPNFC 900 IDGDVQSHPR NNLPFASNLD GLTPDTLLSR GYDSQKDLQN LLSNYGGAPR DIETELSTAA 960 ISSQPFGVPD MPFKPGCSSD IAMNDTGVLN NGLWANQTQR MRTYTKVQKC GSVGRCIDVT 1020 RYKGYDELRH DLARMFGIEG QLEDPQRTEW KLVYVDHEND ILLVGDDPWE EFVSCVQSIK 1080 ILSSAEVQQM SLDGDLGHVP VPNQACSGTD NGNAWRGQYD DNSAASFNR

Sequence ? help Back to Top

Protein Sequence Length: 1129 aa Download sequence

MKAPPNGYLP NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
ADFIPSYPNL PSKLICMLHN VALHADTETD EVYAQMTLQP VNKYDKEAIL ASDMGLKQNQ  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDNTWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIKRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKALYNQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPARWKNSQW RNLQVGWDES TAGERPSRVS IWDIEPVVTP  360
FYICPPPFFR PKFPKQPGMP DDESDIENAF KRAMPWLGDD LGMKDASSSI FPGLSLVQWM  420
SMQQNNQFSA PPSGFVPPSM LSSNTMHGNL NTDDPSKLLS FQAPALSAPS LQFNKPNLPN  480
QVNQMQQSPT SWPPQQQQQQ KLQPMLQTPL NQLQQQQQQQ QQRQQQLPGP QNLPQPQQQQ  540
PQMPQQRAQQ PQQQQQQSCQ QTIMNNGLNG AVASNQIPNQ CVQQPVTYSQ LQQQQLLSGS  600
IPPQQSFQSP NKNTLLMTSL PQDSQFQQQI DQQASLLQRQ QQQQQQTQLQ PSPLHLLQQS  660
LSQRAPQQPQ MTQMSQQNSS EQQPQLQLLQ KLQQQQLQQQ QQQQQLLTTS SPLLQSQLLQ  720
QQNTHQQNQQ LLQLPLSQCH QSQQLGNNAF SMEKLINGNN YSSSALMQTQ QLPVNQPHNT  780
QKSLTNTRAP STLTDGDAPS CSTSPSTNNC QISPPNLMKR NQQVPATLGG PSVVEPTNHL  840
IQELQSKSEM QIKHELPGVR GPDQLKYKGA IADQLEASSG TSYCIDPNNI HQNFQIPNFC  900
IDGDVQSHPR NNLPFASNLD GLTPDTLLSR GYDSQKDLQN LLSNYGGAPR DIETELSTAA  960
ISSQPFGVPD MPFKPGCSSD IAMNDTGVLN NGLWANQTQR MRTYTKVQKC GSVGRCIDVT  1020
RYKGYDELRH DLARMFGIEG QLEDPQRTEW KLVYVDHEND ILLVGDDPWE EFVSCVQSIK  1080
ILSSAEVQQM SLDGDLGHVP VPNQACSGTD NGNAWRGQYD DNSAASFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein