PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX73250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 223aa MW: 25169.4 Da PI: 9.6054 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.9 | 1.6e-19 | 84 | 117 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C+tt+TplWR+gp+g+k+LCnaCG+++rk + RDX73250.1 84 CADCNTTTTPLWRSGPNGPKSLCNACGIRQRKAR 117 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MYYDGKHVFH VGSSNNNQVC NSSSVQAYPS SACDHDNLSF YKIEDEENKR GYEYEKWMSS 60 NERFTRKTMS PPRSNKAFNI IRVCADCNTT TTPLWRSGPN GPKSLCNACG IRQRKARRAM 120 AETANGVGPS MDASSSTKTR VHDKEKKCRT NHFARFKNKC KATTTTTAAG KSQQEEVKID 180 FKDFAIILKL RDKNSAFRQV FPMDEVAEAA LLLMDLSSAF VQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 1e-24 | GATA family protein |