PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX72631.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 293aa MW: 33300.4 Da PI: 5.7316

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX72631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.8	2.8e-36	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC+++C lapyfpa+qpk f nvh+lFG+sn++k+lk l+++++++am+s++ +A+ r + Pv+G+ + i kl+ q+ +++el+++ + RDX72631.1 10 ACAACKHQRRKCTSECLLAPYFPADQPKVFLNVHRLFGVSNIVKILKILEPSQKKIAMDSIIIQANYRDKYPVHGCWEEICKLHYQIWLAEEELHAVLQ 108 7*********************************************************************************************99877 PP DUF260 100 e 100 + RDX72631.1 109 Q 109 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MTLKGGTAQA CAACKHQRRK CTSECLLAPY FPADQPKVFL NVHRLFGVSN IVKILKILEP 60 SQKKIAMDSI IIQANYRDKY PVHGCWEEIC KLHYQIWLAE EELHAVLQQL DMCRQQQQQH 120 YPGPSMPDDV TSQLELGMTP RINNALPLFN HHTPQPQPQP HTYNTLAPVS QQHSYSNSNS 180 IDYNSLYLDS KDNPSNPLWV QYPYANNNSN SVGMQTSLIS SQPLAIQQDV VEDYDEIHPI 240 FDSVDDRQSY IYSKEAYESS SEESLKDMRK CTDNVSENEL KSAAACFSLT SVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	2e-44	LBD family protein