PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX71495.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ZF-HD | ||||||||
Protein Properties | Length: 259aa MW: 28132.6 Da PI: 7.5017 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 97.6 | 9.6e-31 | 55 | 109 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +YkeClkNhA+ +Ggha+DGC+Efm++ g+egt +alkCaAC+CHRnFHR+e +e RDX71495.1 55 GKYKECLKNHAVGIGGHALDGCCEFMAA-GAEGTLDALKCAACNCHRNFHRKEATE 109 58*************************9.999********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEFEEQEEAE LGMPGASYDD SAFNPCRVKM PSHGEEEPVA VPVTPPTMTR NSGKGKYKEC 60 LKNHAVGIGG HALDGCCEFM AAGAEGTLDA LKCAACNCHR NFHRKEATES PFLLPFHHRR 120 HQPPQFAAYY RAPAGYLHVA GQQRGGVATL ALPSTSGAGG GTQSPREDQE DVSDPSGGGS 180 RKRFRTKFTQ EQKDKMLGFA EKLGWRIQKH DESVVQEFCS QTGVQRHVLK LPSQPPFQAG 240 SSTKSKLGNC VAECLTSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 5e-60 | ZF-HD family protein |