PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX71105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 208aa MW: 23442.2 Da PI: 9.9982 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.5 | 1e-07 | 80 | 120 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+++ ++ L++l+P++ kK++ a+ Le+A +Y+k Lq RDX71105.1 80 RQRRQKLSEKTRCLQKLMPWD-----KKMDQATLLEEAYKYVKFLQ 120 9*******************9.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MFSGDGSSMD PMFSGMSLQS LLCLNPSLLG EGFPSLGSLT DEPNVIPQSA QKVVLLPKSE 60 SQAKRQRLDS SVIPQSNLAR QRRQKLSEKT RCLQKLMPWD KKMDQATLLE EAYKYVKFLQ 120 AQFRVLHSMP SNTDPFLLPP IQNAAVFGEL DKLNRTQLLQ VLVNSPVAQT MLYSQGFCVF 180 SLEQLSLLRK LSQRRHQHLP DPKLPSTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22100.1 | 3e-23 | bHLH family protein |