PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX71055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 169aa MW: 19212.8 Da PI: 6.0143 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 139.1 | 5e-43 | 12 | 96 | 84 | 170 |
YABBY 84 snvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ +++ + ++ +++ + ee+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl RDX71055.1 12 MM-MNQLPNPNDLVMST-MRGGPEETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 96 22.22222333333333.35677899***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 169 aa Download sequence |
QEEIRNAPST NMMMNQLPNP NDLVMSTMRG GPEETPKPPS ANRPPEKRQR VPSAYNRFIK 60 DEIQRIKAGN PDISHREAFS AAAKNWAHFP HIHFGLMPDH QPVKKANVRQ EAEDVLMKDG 120 FFAPANYFLV LQVVSLCYNQ WWEGILTKLA EISSSENEDG LFSVELVPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-53 | YABBY family protein |