PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71002.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 728aa MW: 80644 Da PI: 7.7166

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	79.4	3.7e-25	157	258	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + +++el+ RDX71002.1 157 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGEDGELR 252 99**************************963.3445679********************************************..449999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ RDX71002.1 253 LGIRRA 258 ***996 PP
2	Auxin_resp	118.8	4.5e-39	283	364	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+++F++ YnPr+s+seF+v+++k++k+l+ ++svGmRf+m+feted++err++G++vg++d+dpvrWp+SkWr+L RDX71002.1 283 VINALSTRCAFSIHYNPRVSSSEFIVPIHKFLKSLDYSYSVGMRFRMRFETEDAAERRFTGLIVGITDVDPVRWPGSKWRCL 364 5799*****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MAALIDLNTS TDDDDTPSSP VCLELWHACA GPMISLPKKG TTVVYFPQGH FEHLRDFPLP 60 SSVNIPSHVF CRVLDVKLHV SLPLLFSPYK FKMLSAFVLV WFLPSNAEEG SDEVYCQVLL 120 VPESEQVQQK LREGEIDADG EEEDAEAVMK STTPHMFCKT LTASDTSTHG GFSVPRRAAE 180 DCFPPLDYSQ QRPSQELVAK DLHGQEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA 240 VLFLRGEDGE LRLGIRRAAQ LKSGSSFSAL SGQQLNLSSL VDVINALSTR CAFSIHYNPR 300 VSSSEFIVPI HKFLKSLDYS YSVGMRFRMR FETEDAAERR FTGLIVGITD VDPVRWPGSK 360 WRCLMVRWDD LEATRHNRVS PWEIEPSTSA STANNLMSAG LKRTKIGLPS AKLEFSVPNS 420 IGTSDFGESL RFQKVLQGQE ILGVNTTFDG INAQSHQLPE FRRCYPGSNY PRIAATGNSI 480 GIPQMSSNVT CNGIGFSESF RFQKVLQGQE ILPSQPYGRS LSVDEACGNG HFGLFEGYQA 540 PRSRNGWSSH LHPPVSSGLV SSPSSVLMFQ QAVNPVSNSD YNNKFNQAME GKFHRGSYTT 600 EVKGGKFVST PYEPLLRGLA QEGTNSFGLP NFHNQLDSSR SQNSISVLRA SQELVPSCKS 660 RCRVFGFSLT EGAPVANKEA ADPSVVTCSG PSFTRHVEDD FHPGHSLRSK AVGSYCTKVS 720 SLYPLRHM

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MAALIDLNTS TDDDDTPSSP VCLELWHACA GPMISLPKKG TTVVYFPQGH FEHLRDFPLP  60
SSVNIPSHVF CRVLDVKLHV SLPLLFSPYK FKMLSAFVLV WFLPSNAEEG SDEVYCQVLL  120
VPESEQVQQK LREGEIDADG EEEDAEAVMK STTPHMFCKT LTASDTSTHG GFSVPRRAAE  180
DCFPPLDYSQ QRPSQELVAK DLHGQEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA  240
VLFLRGEDGE LRLGIRRAAQ LKSGSSFSAL SGQQLNLSSL VDVINALSTR CAFSIHYNPR  300
VSSSEFIVPI HKFLKSLDYS YSVGMRFRMR FETEDAAERR FTGLIVGITD VDPVRWPGSK  360
WRCLMVRWDD LEATRHNRVS PWEIEPSTSA STANNLMSAG LKRTKIGLPS AKLEFSVPNS  420
IGTSDFGESL RFQKVLQGQE ILGVNTTFDG INAQSHQLPE FRRCYPGSNY PRIAATGNSI  480
GIPQMSSNVT CNGIGFSESF RFQKVLQGQE ILPSQPYGRS LSVDEACGNG HFGLFEGYQA  540
PRSRNGWSSH LHPPVSSGLV SSPSSVLMFQ QAVNPVSNSD YNNKFNQAME GKFHRGSYTT  600
EVKGGKFVST PYEPLLRGLA QEGTNSFGLP NFHNQLDSSR SQNSISVLRA SQELVPSCKS  660
RCRVFGFSLT EGAPVANKEA ADPSVVTCSG PSFTRHVEDD FHPGHSLRSK AVGSYCTKVS  720
SLYPLRHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein