PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX70678.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 342aa MW: 38231 Da PI: 7.6847

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX70678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl RDX70678.1 14 KGPWSPEEDAKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.7	2.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ RDX70678.1 69 GGFSEEEDNIICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 HRKELQARNK GNGVVKQENN SPLLLQENSV QQKPCWPQIP VLPLSPYANH SPSFNDQDSI 180 RKLLIKLGGR FSHDYQPILD GLNDIQFSHG SPSPIKQIQE EQVHVGSSGC MSSIDNNQLQ 240 FGQSNGYCAA ELVQGQGNFN ATIGEMVSTN DYSHGLEFFY GEEMITDNKI MGVSSSCGQS 300 STNWGESSSL MYPPLVVSNY EDVRQEMPRE CAFQELSYPG AQ

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
HRKELQARNK GNGVVKQENN SPLLLQENSV QQKPCWPQIP VLPLSPYANH SPSFNDQDSI  180
RKLLIKLGGR FSHDYQPILD GLNDIQFSHG SPSPIKQIQE EQVHVGSSGC MSSIDNNQLQ  240
FGQSNGYCAA ELVQGQGNFN ATIGEMVSTN DYSHGLEFFY GEEMITDNKI MGVSSSCGQS  300
STNWGESSSL MYPPLVVSNY EDVRQEMPRE CAFQELSYPG AQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-80	MYB family protein