PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX69811.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 345aa MW: 38971.1 Da PI: 8.676

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX69811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.5	1.1e-18	200	254	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k RDX69811.1 200 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 254 788899***********************************************98 PP
2	HD-ZIP_I/II	124.5	4.9e-40	200	289	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l RDX69811.1 200 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCESLTDENRRLKKELQELK-AL 289 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MVNLCKRYTK EFDYLQYEDS FLYSFLRLIN NNHSHPPTHP TPPQKIRTSP PLTALFSEMG 60 LHQDANSSGL HLVLGLSLTA TTKESTTPST KPENHLCVIK PTPTKPYSSN EPSLTLGLSG 120 ESYHVAKQVP RNNNNNNKVY CDDPLDLSRQ ASPHSVVSSF SSGRVVKRER DLSCEEIEVE 180 AEERVSSRVS DEDEDGTNAR KKLRLTKEQS ALLEESFKQH STLNPKQKQA LARQLNLRPR 240 QVEVWFQNRR ARTKLKQTEV DCEFLKKCCE SLTDENRRLK KELQELKALK LAQPLYMPMP 300 AATLTMCPSC ERLGGVNDNG SNKSPFSLAP KPHFYNPFAN PSAAC

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MVNLCKRYTK EFDYLQYEDS FLYSFLRLIN NNHSHPPTHP TPPQKIRTSP PLTALFSEMG  60
LHQDANSSGL HLVLGLSLTA TTKESTTPST KPENHLCVIK PTPTKPYSSN EPSLTLGLSG  120
ESYHVAKQVP RNNNNNNKVY CDDPLDLSRQ ASPHSVVSSF SSGRVVKRER DLSCEEIEVE  180
AEERVSSRVS DEDEDGTNAR KKLRLTKEQS ALLEESFKQH STLNPKQKQA LARQLNLRPR  240
QVEVWFQNRR ARTKLKQTEV DCEFLKKCCE SLTDENRRLK KELQELKALK LAQPLYMPMP  300
AATLTMCPSC ERLGGVNDNG SNKSPFSLAP KPHFYNPFAN PSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	257	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-72	HD-ZIP family protein