PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68927.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 462aa MW: 50897.3 Da PI: 6.7886

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.5	1.7e-13	116	169	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgk....fgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g RDX68927.1 116 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGEdasgFDTAHAAARAYDRAAIKFRG 169 78*****************......55**88888***************997 PP
2	AP2	41.7	2.9e-13	212	262	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g RDX68927.1 212 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSELEAARAYDRAAIKCNG 262 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MLDLNLNADS ASDNNTPPLS AAQMESSGSF NSSVVNAADT EDSCSYGDAV AYNFAILNTT 60 AAVGDSSVRT IQLFPTAESG ASPGWLNHRG AAPEQRITPR QPQVKKSRRG PRSRSSQYRG 120 VTFYRRTGRW ESHIWDCGKQ VYLGEDASGF DTAHAAARAY DRAAIKFRGV DADINFNVSD 180 YDEDIKQMSN FTKEEFVHIL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYIYL 240 GLFDSELEAA RAYDRAAIKC NGREAVTNFE PSLYEGDVIS QSDNEDSKQS LDLNLGIAPP 300 SYSDGQFKNT PSNGSGLKAP HSWDDIPVDK RVMFEHSGSR SLNVQPSHDF SIASEHHPSV 360 WSRSNFFPIC EETAIEKRME SAPMPNWAWQ VQNPYGGATL TPPFSTAASS GFPSTVIPSA 420 ADSQIRFPNM TFLHPHFPPS ITNSSTISTF YCGTAKLSYG LC

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MLDLNLNADS ASDNNTPPLS AAQMESSGSF NSSVVNAADT EDSCSYGDAV AYNFAILNTT  60
AAVGDSSVRT IQLFPTAESG ASPGWLNHRG AAPEQRITPR QPQVKKSRRG PRSRSSQYRG  120
VTFYRRTGRW ESHIWDCGKQ VYLGEDASGF DTAHAAARAY DRAAIKFRGV DADINFNVSD  180
YDEDIKQMSN FTKEEFVHIL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYIYL  240
GLFDSELEAA RAYDRAAIKC NGREAVTNFE PSLYEGDVIS QSDNEDSKQS LDLNLGIAPP  300
SYSDGQFKNT PSNGSGLKAP HSWDDIPVDK RVMFEHSGSR SLNVQPSHDF SIASEHHPSV  360
WSRSNFFPIC EETAIEKRME SAPMPNWAWQ VQNPYGGATL TPPFSTAASS GFPSTVIPSA  420
ADSQIRFPNM TFLHPHFPPS ITNSSTISTF YCGTAKLSYG LC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-105	AP2 family protein