PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX68346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 196aa MW: 22647.8 Da PI: 8.614 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 117.9 | 6.1e-37 | 4 | 101 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 aCaaCk++r+kC+++C+l+pyfp++++++f +vhk+FG+sn++kl+k+++ee+r+++++sl++eA++r+rdP++G +g ++k+ ++++++ el++ k RDX68346.1 4 ACAACKHQRKKCSENCILSPYFPSSRSREFHAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELKRFK 101 7*****************************************************************************************99998766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MHPACAACKH QRKKCSENCI LSPYFPSSRS REFHAVHKVF GVSNITKLVK NAKEEDRRRV 60 VDSLIWEACC RQRDPIHGPY GEYTKVYNEY KKVLDELKRF KGQNQLLQFP PLGLKDLISC 120 NGTKGEHKAE VDSALDYLHG KKNGIIDSDI YNTYCSNYLQ EFQNMRSEVV IPFQQHSQPY 180 YIADLCGFKF VIFSGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 3e-39 | LBD family protein |