PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67228.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 511aa MW: 53445 Da PI: 8.3307

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX67228.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	11.2	0.0012	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + RDX67228.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MPVDLDNVST VSGEASVSSS GNQTVAPKPT TKKKRNLPGM PDPDAEVIAL SPKTLMATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVRKR VYVCPEPTCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT 180 HRAFCDALAE ESARSTPQTV VKASSESESK AVTGDSSPPP PAVVAPPPPV SSQSNSVVVP 240 SPALQTQNPE LPENSPPIIE EPQPNTAMNG SCSSTSTSST SNSNGGASSS VFASLFASST 300 ASATASLQSQ TPAFTDLIRA MGHPDHPADL SRPSSSEPIS LCLATNHGSS IFAAGGQERR 360 QYTPPPQPAM SATALLQKAA QMGAAATNAS FLRGLGIVSS SASTSSGQQD SLQWGQQPVE 420 PESTSVPAGL GLGLPCDSSS GLKELMMGTP SMFGPKQTTL DFLGLGMAAG GTPGGGLSAL 480 ITSIGGGLDV TTAVASFGSG EFPGKDIGMS T

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MPVDLDNVST VSGEASVSSS GNQTVAPKPT TKKKRNLPGM PDPDAEVIAL SPKTLMATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVRKR VYVCPEPTCV HHDPSRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIT  180
HRAFCDALAE ESARSTPQTV VKASSESESK AVTGDSSPPP PAVVAPPPPV SSQSNSVVVP  240
SPALQTQNPE LPENSPPIIE EPQPNTAMNG SCSSTSTSST SNSNGGASSS VFASLFASST  300
ASATASLQSQ TPAFTDLIRA MGHPDHPADL SRPSSSEPIS LCLATNHGSS IFAAGGQERR  360
QYTPPPQPAM SATALLQKAA QMGAAATNAS FLRGLGIVSS SASTSSGQQD SLQWGQQPVE  420
PESTSVPAGL GLGLPCDSSS GLKELMMGTP SMFGPKQTTL DFLGLGMAAG GTPGGGLSAL  480
ITSIGGGLDV TTAVASFGSG EFPGKDIGMS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-116	C2H2 family protein