PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX66655.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 602aa MW: 66363.9 Da PI: 9.1649

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX66655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	111	133	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H RDX66655.1 111 FICEVCNKGFQREQNLQLHRRGH 133 89*******************88 PP
2	zf-C2H2	12.5	0.00046	187	209	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ RDX66655.1 187 WKCEKCSKKYAVQSDWKAHSKTC 209 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MPLAGQPTIQ EIKEKIKHTS AISSRFANNY GGSFLIHSIL GNQRRKLKSD YFTPSTLHSC 60 SSKETEESTW NTMQRRVFFN NLLFVIFDGV KDPDAEVIEL SPKTLMATNR FICEVCNKGF 120 QREQNLQLHR RGHNLPWKLK QKSTKEPKRK VYLCPEPTCV HHDPSRALGD LTGIKKHYSR 180 KHGEKKWKCE KCSKKYAVQS DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAQ 240 ESARYPSGLN PLGNHLFGTN HSSLSLSQVG TQLSQVHNQN QTATNNNSIL RLGNVGAAPK 300 FEHLIPPLNH SSFGHSPQSM HSSAFFISDS TNQAFEEHQS HQGPLFSSKQ LHGLMQLADL 360 QRNNNNSGSS SVAAPSNLFN LSFFPSSNST TIIPDSFNNI NGSDQGTTTP PPLYVNNNPA 420 VSDQVGSSFS SLFGNSIENV SFPHMSATAL LQKAAQMGST TTTNGSSSLL GGMCGSSNNN 480 GSSKADENDH HHHNLHGLMN SIANGNTSLF GNMQGNENNL CGFHNMDESN SKLPQNLNVN 540 FGGSDKLTLD FLGVGGVVRN MSGGFSQREQ QQQQRVMGTM SSLNHDLKSA QSNLHFGRST 600 LQ

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MPLAGQPTIQ EIKEKIKHTS AISSRFANNY GGSFLIHSIL GNQRRKLKSD YFTPSTLHSC  60
SSKETEESTW NTMQRRVFFN NLLFVIFDGV KDPDAEVIEL SPKTLMATNR FICEVCNKGF  120
QREQNLQLHR RGHNLPWKLK QKSTKEPKRK VYLCPEPTCV HHDPSRALGD LTGIKKHYSR  180
KHGEKKWKCE KCSKKYAVQS DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAQ  240
ESARYPSGLN PLGNHLFGTN HSSLSLSQVG TQLSQVHNQN QTATNNNSIL RLGNVGAAPK  300
FEHLIPPLNH SSFGHSPQSM HSSAFFISDS TNQAFEEHQS HQGPLFSSKQ LHGLMQLADL  360
QRNNNNSGSS SVAAPSNLFN LSFFPSSNST TIIPDSFNNI NGSDQGTTTP PPLYVNNNPA  420
VSDQVGSSFS SLFGNSIENV SFPHMSATAL LQKAAQMGST TTTNGSSSLL GGMCGSSNNN  480
GSSKADENDH HHHNLHGLMN SIANGNTSLF GNMQGNENNL CGFHNMDESN SKLPQNLNVN  540
FGGSDKLTLD FLGVGGVVRN MSGGFSQREQ QQQQRVMGTM SSLNHDLKSA QSNLHFGRST  600
LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	8e-97	C2H2 family protein