PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX65953.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 262aa MW: 28324.7 Da PI: 5.4467 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 134 | 184 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a+++a+ +++g RDX65953.1 134 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 184 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MYEQSAYESD WALLDSIRRH LLGDSEEYKF GAPNVNSGNT GSGFSSLQLH PCLSDDWGEL 60 PLKEDDSEDM LLYGVLSDAI DVGWVPSLDA ASPESFSSVT VKSEPDLFPA PEPVFIAPVV 120 EKAVPVTVPA KGKHYRGVRQ RPWGKFAAEI RDPAKNGARV WLGTFETAED AALAYDRAAY 180 RMRGSRALLN FPLRINSGEP EPVRITAKRA SPEPSSSSES GASAKRRKKV VGSTVTGQGA 240 LRTGQVGSQV AQCTRGEQLL VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-66 | ERF family protein |