PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX64674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 200aa MW: 22749.2 Da PI: 4.8193 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 83.2 | 3.9e-26 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aC C+++rr+ ++Cv+ +yfp +++ +f+ + +lFG n+l+l++ ++++er+ +++s++ eA+++a+dP +Ga+g++++l +++++ + el+ +++ RDX64674.1 10 ACPLCRHQRRRHDDSCVFGQYFPYNRSIDFERACRLFGLGNLLRLMRFVEPSERQVIANSILREANMWANDPFHGAFGHVFNLISEIQSFERELEIVNK 108 699******************************************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MNEENIDYHA CPLCRHQRRR HDDSCVFGQY FPYNRSIDFE RACRLFGLGN LLRLMRFVEP 60 SERQVIANSI LREANMWAND PFHGAFGHVF NLISEIQSFE RELEIVNKML AYCQDQARQE 120 NQSSQIDIYP LVISSSSNIP QQNTQLGGSG TQIPSLGGAD IHVNYFEKGE SSTLASKENE 180 IVAKERDSGV DGKEEDITSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50510.1 | 2e-21 | LBD family protein |