PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX62556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | Nin-like | ||||||||
Protein Properties | Length: 243aa MW: 28212.6 Da PI: 6.862 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 78.3 | 8.7e-25 | 133 | 182 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++++++k+F+ pi++AAk+++v+lT+LKr+CR+++I+RWPhRk+ksl RDX62556.1 133 SALEFDEIKKHFDVPITEAAKQMKVGLTLLKRRCRELNIMRWPHRKLKSL 182 6799********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MDIFSNPEII PHVFDSWCCD TDNIMMEVSP LEGFSEHDWT LEWPYSSNQL CFNELPDIEN 60 LKFDFDLPLL GEVEQKPSNI VVPEKGHCNR DGFVAIENGF ASCVKKEEVE KENIHERVSL 120 SVPSGTRKKK KSSALEFDEI KKHFDVPITE AAKQMKVGLT LLKRRCRELN IMRWPHRKLK 180 SLTLLIDNVK EMGLANEVAM LEKHKTMLEK LPGLELSEET KKLRQACFKA KYNRRRYYSA 240 LQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 2e-38 | Nin-like family protein |