PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX62111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 208aa MW: 23158.2 Da PI: 6.0967 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 119.6 | 1.8e-37 | 14 | 115 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aC++lrrkC++dC++apyf +eq + +fa++hk++Gasnv+kll a+p ++r +a+ +++yeA+ar+ dPvyG+v++i++lqqq+++l+a+l ++k RDX62111.1 14 PCGACRFLRRKCSADCIFAPYFSSEQgAGRFAAIHKVYGASNVTKLLLAIPIQHRCEAIFTIAYEAQARITDPVYGCVSHIFALQQQVACLQAQLMQMK 112 7***********************9988*******************************************************************9999 PP DUF260 99 eel 101 e+l RDX62111.1 113 EQL 115 875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGSGSGNESG FGSPCGACRF LRRKCSADCI FAPYFSSEQG AGRFAAIHKV YGASNVTKLL 60 LAIPIQHRCE AIFTIAYEAQ ARITDPVYGC VSHIFALQQQ VACLQAQLMQ MKEQLDQKKM 120 ESRNLENHWS ENVGQPFNPF CPISMNNPIS PQSSLDSIDY SNINDGKSMQ DVQSREDFSF 180 QACSNKISYN NDLGELQELA LRMMRNCD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 4e-61 | LBD family protein |