PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61756.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 322aa MW: 37051.2 Da PI: 4.561

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.5e-18	83	136	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++ +LAk+lg++ rqV +WFqNrRa+ k RDX61756.1 83 KKRRLTSEQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFK 136 56689***********************************************98 PP
2	HD-ZIP_I/II	128.9	2.1e-41	83	174	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eqv++LE++Fe e+kLeperKv+la+eLg+qprqva+WFqnrRAR+ktkqlEkdy +Lk++yd+l+++ ++L +++++L+ee+++ RDX61756.1 83 KKRRLTSEQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYGTLKASYDTLQRDYDNLLQKNDKLKEEVNS 174 9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MASEKLHGSS SMTLLLQKER LPCSSELIQP FWVQNQNSEP SFQGSKSLTN VVNVTDRPFF 60 QGLEKEENGD DEDFEVCLHQ PGKKRRLTSE QVQFLESNFE VENKLEPERK VQLAKELGMQ 120 PRQVAIWFQN RRARFKTKQL EKDYGTLKAS YDTLQRDYDN LLQKNDKLKE EVNSLKKRLI 180 PREKEEENLD DTCCDGVNSQ QKEKKDLMIN TCSENGSKVK LPVMAISKQE DANSAKSDVV 240 DSESPHFTDG NQSSFVEPAD SSHALEPDHS DFSQDEEDIL SQNILTMPFL PKVVDVSYDQ 300 LPENSSSFRF PLEDQTFCFW SY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	RRARFKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	7e-45	HD-ZIP family protein