PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX61163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 230aa MW: 25370.3 Da PI: 8.3997 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.6 | 5.1e-39 | 43 | 143 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +kll ++p ++r da+ +l+yeA arardPvyG+vg++++lqqq+ +l+ael +++ RDX61163.1 43 PCGACKFLRRKCVKGCIFAPYFDSDQgTAHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVINLQAELTYVQ 141 7***********************9989********************************************************************998 PP DUF260 99 ee 100 ++ RDX61163.1 142 AR 143 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
KPLIYIYSNI SFLVPHKISW LNPELRVEMD CGGKIGGSER GGPCGACKFL RRKCVKGCIF 60 APYFDSDQGT AHFAAVHKVF GASNASKLLM RIPVHKRLDA VVTLCYEALA RARDPVYGCV 120 GHLFALQQQV INLQAELTYV QARLATMQRL PMSVASLAHP QSSSSPPTLL SSDQLPSNAD 180 LQSASMHLEL YQPHSTSLEL SNVFNPLDQQ FQDRELQALA REFVARCLPG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00210.1 | 3e-67 | LBD family protein |