PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX60869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 324aa MW: 36625 Da PI: 6.9888 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.3 | 1.7e-24 | 145 | 205 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD ++WrKYGqK +++sefpr Y+rC+++ gC+++k+v+r++e+p++ ++tY g H+++ RDX60869.1 145 DDNHAWRKYGQKRIQNSEFPRCYFRCSHKydqGCRATKQVQRDEENPNMYQTTYIGIHTCN 205 8***************************99999**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MQIMSILVKI LNKMKRMVCG ESESVSGKKK RLIMKELVKG QEAATQLKLL LQNPFGSEVS 60 LSSQELMTIV LTSFTQALSI ITSSSLEPSS AHDLTHRTLL NASPVATSGN DPSSDGGNRS 120 RKAGRGRYNR RRSALAWTIV SCATDDNHAW RKYGQKRIQN SEFPRCYFRC SHKYDQGCRA 180 TKQVQRDEEN PNMYQTTYIG IHTCNASSTD STDWESYLVN SDRDSNLPNL QDRHIISSPS 240 LTIKQQFPKE ETPTDVIDHK LDPNLWSDLN DFQPSKPTTM PLQMESDNAD NEYSYTDSQC 300 LLMDFGVASV HFGTDFHFDQ SQLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 7e-27 | WRKY family protein |