PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX60512.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 797aa    MW: 88603.8 Da    PI: 5.9867
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX60512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.72.7e-2092147156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  RDX60512.1  92 KKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMK 147
                 688899***********************************************998 PP
2START1471.8e-462925162206
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv............dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                 +a + ++elvk+   +ep+W +s   e + evl  +e ++              ++ea+r+++vv+m++++lv  +ld   +W e ++    +a+t++ 
  RDX60512.1 292 FAASSMAELVKMCHTNEPLWIRSN--ESEREVLNFEEHARMfplplnlknrseLRTEASRDTAVVIMNSVTLVDAFLDAQ-KWMELFPtivsRAKTVQI 387
                 67889*******************..889999988888777999************************************.9*999999999******* PP

                 ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
       START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                 is+g      g+lqlm+ae+ +lsplv+ R+  f+Ry++q  ++g+w+ivd  vds  ++  ++s+ R  ++ Sg++i++++ng+s+vtwveh+ ++++
  RDX60512.1 388 ISTGasghasGTLQLMYAEFLVLSPLVStRETHFLRYCQQnAEEGTWAIVDFPVDSFHQNF-HPSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKVEEK 485
                 ********************************************************99999.9************************************ PP

                 XXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 176 lphwllrslvksglaegaktwvatlqrqcek 206
                  +h+++   v sg+a+ga++w+  lqrqce+
  RDX60512.1 486 PVHQIFCNYVYSGMAFGAQRWLGVLQRQCER 516
                 *****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 797 aa     Download sequence    
MYGDCQVMSS MGGNVVVNSD TLFSSSIQNS NFNFIPTMPF QPFPSMISSS LLKQKEEDGM  60
LRGKEEMESG SGSEQVEDKS GNEQESEQAT KKKRYHRHTA RQIQEMEALF KECPHPDDKQ  120
RLKLSHELGL KPRQVKFWFQ NRRTQMKAQQ DRADNVILRA ENETLKSENY RLQAALRSVI  180
CPNCGGPCIM GADLGLDEHQ LRIENARLRE ELERVCCLTT RYTGRSIQTM AAGATLMAPS  240
LDLDMNIYPR HFADPIAPCT EMIPVPMLPP EASPFAEGGV LMEEEKSLAL EFAASSMAEL  300
VKMCHTNEPL WIRSNESERE VLNFEEHARM FPLPLNLKNR SELRTEASRD TAVVIMNSVT  360
LVDAFLDAQK WMELFPTIVS RAKTVQIIST GASGHASGTL QLMYAEFLVL SPLVSTRETH  420
FLRYCQQNAE EGTWAIVDFP VDSFHQNFHP SYPRYCRRSS GCVIQDMPNG YSRVTWVEHA  480
KVEEKPVHQI FCNYVYSGMA FGAQRWLGVL QRQCERVASL MARNISDLGV IPSPEARKNL  540
MKLAQRMIKT FGLNMSTSGG QSWTAISDSP EDTVRITTRK ITEPGQPNGV ILSAVSTTWL  600
PYSHTKVFDL LRDERHRSQM DALSNGNSLN EVAHIANGSH PGNCISLLRI NVASNSSQNV  660
ELMLQESCTD PSGSLVVYTT IDVDSIQLAM SGEDPSCIAL LPQGFMIVPM ISSPNVDTPI  720
DANTSQPPPL NSGCLLTMGL QVLASTIPSA KLNLSSVTAI NNHLCNTLHQ IEAALSSSHD  780
NATFLCTEPT TSAPLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein