PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX59658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 189aa MW: 21858.8 Da PI: 9.274 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 70.2 | 2.9e-22 | 131 | 189 | 1 | 56 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeH 56 ++Dgy+WrKYGqK+ ++++ rsYYrCt++ gC++ k+v+r ++dp + +tY g+H RDX59658.1 131 VEDGYAWRKYGQKMTLNAKYIRSYYRCTYKndqGCQAIKQVQRIQDDPPLYRTTYYGHH 189 58***************************98999***********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MENQLPNGKK AVEEEIIRGR DMANQLLEVL VHGKREEGTK SALPFIEDLV RKVLCSFTNT 60 LLLLNSNIDV SNEVVAYTTL RDVSSSTSCP KLESVDETLK SRNILNPKNR RGCYKRKSIT 120 PTWEKDSSIQ VEDGYAWRKY GQKMTLNAKY IRSYYRCTYK NDQGCQAIKQ VQRIQDDPPL 180 YRTTYYGHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 9e-34 | WRKY family protein |