PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX59657.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WOX | ||||||||
Protein Properties | Length: 240aa MW: 27680.2 Da PI: 8.4873 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.7 | 2.7e-20 | 44 | 103 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Leel+++ r+psa+++++++++l +++ ++V++WFqN++a++++ RDX59657.1 44 SRWSPTTEQLMILEELYRSgIRTPSASQIQQITTHLsfygRIEGKNVFYWFQNHKARDRQ 103 7*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 117.8 | 5e-38 | 43 | 104 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+Pt+eQ++iLeely+sG+rtP++++iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqk RDX59657.1 43 SSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQK 104 79***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MVQQGCERWE HWNKYGLAAE LEVFNLSGSS SKRERSMSPA AGSSRWSPTT EQLMILEELY 60 RSGIRTPSAS QIQQITTHLS FYGRIEGKNV FYWFQNHKAR DRQKLRRKLS KQLQLQQQQL 120 QLHHCQMNQD ITNHFGGTFA YTTPRSTTQD FPFFNSPTLL FQGEAANTSE QALCCKWSVH 180 NPQCNLVEKK EVTFCNYGWT LVDVNQASSC CTRPLKTLDL FPLTTTRINE DCTTTPPKEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 1e-32 | WOX family protein |