PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX57899.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GeBP

Protein Properties

Length: 479aa MW: 53083.9 Da PI: 4.968

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX57899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	122.2	2.5e-38	107	202	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqrlw++eDei lLqG++d++a++g+s ++d+ fy+++k++++++++k+qlveKirrLKkK+++ +k+ sgke+sf+++hdq +fe+s+kiW RDX57899.1 107 LFQRLWTDEDEIELLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVINKIGSGKEFSFKSAHDQATFEISRKIWS 202 79*********************************************************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MASQQHDAVF REEDMDDDDD ESQEDEEYEE DDDVLADDEE NEPSPSASSA LAVTVAVPGS 60 ALSNGGAAPI STPTATTIVV SDSSDPKRRR VEQIEEKKPA LDDSRRLFQR LWTDEDEIEL 120 LQGFLDYTAQ RGSSHHNDTA LFYDQIKSKL QLDFNKNQLV EKIRRLKKKY RNVINKIGSG 180 KEFSFKSAHD QATFEISRKI WSNVAPIGDN SLDDDEINPS PNPNPNPSPN LNFSPVILKN 240 DMIFRSSAEK KTPKRPRPRS AVKIESNDGS ASNRDHNFIS NATTSTVTPT ATTNTVPTAT 300 TAANNNNNNN NNNNNCNSGG YSNNIPSLIE DTVKSCLSPV LKELVAGAMG GAFGARGGFS 360 LNLNPIPLMN LNFSGGELVD EKWRKQQILE LEVYSKRLEL VQDQIKAAME ELRSGGGGDL 420 RLNLSINGWL INSLAVSWHK LRLIKPPPFL RKRGEKQKGP ESREGKGLRD EGCLLRFMQ

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MASQQHDAVF REEDMDDDDD ESQEDEEYEE DDDVLADDEE NEPSPSASSA LAVTVAVPGS  60
ALSNGGAAPI STPTATTIVV SDSSDPKRRR VEQIEEKKPA LDDSRRLFQR LWTDEDEIEL  120
LQGFLDYTAQ RGSSHHNDTA LFYDQIKSKL QLDFNKNQLV EKIRRLKKKY RNVINKIGSG  180
KEFSFKSAHD QATFEISRKI WSNVAPIGDN SLDDDEINPS PNPNPNPSPN LNFSPVILKN  240
DMIFRSSAEK KTPKRPRPRS AVKIESNDGS ASNRDHNFIS NATTSTVTPT ATTNTVPTAT  300
TAANNNNNNN NNNNNCNSGG YSNNIPSLIE DTVKSCLSPV LKELVAGAMG GAFGARGGFS  360
LNLNPIPLMN LNFSGGELVD EKWRKQQILE LEVYSKRLEL VQDQIKAAME ELRSGGGGDL  420
RLNLSINGWL INSLAVSWHK LRLIKPPPFL RKRGEKQKGP ESREGKGLRD EGCLLRFMQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	91	KRRRV
2	254	258	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	6e-56	GeBP family protein