PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX57757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 213aa MW: 23440 Da PI: 9.9432 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16 | 2.2e-05 | 172 | 198 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 h ++Er+RR+++ ++f L +P + RDX57757.1 172 DHIMAERKRRQELTERFIALSATIPGL 198 699**********************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MGEDNSNGQS HINPLDHHDK FLNGIFQQQP PNYFSFQSVQ QQHSSTMPYN NNVFPSTSTL 60 GSSSTSLSYD ERHGKMLKSN SSNSIISQDV GSHIPSSAPP PSSTFILSFE NSTVEPALHD 120 HGPNSPKHFG GEATCSSLLS SERTLTSNHN NVTKPKAKKG NKKLRSSSEI QDHIMAERKR 180 RQELTERFIA LSATIPGLKK VSATIPKIIF HKS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 182 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22750.1 | 1e-12 | bHLH family protein |