PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX57720.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 293aa MW: 32950.6 Da PI: 6.7087

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX57720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.5	1.3e-19	135	189	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Lee F+++++++ ++++eLA+kl+L rqV vWFqNrRa+ k RDX57720.1 135 RKKLRLTKEQSSILEENFREHSTLNPKQKQELAMKLNLRARQVEVWFQNRRARTK 189 78889************************************************98 PP
2	HD-ZIP_I/II	120.5	8.5e-39	135	223	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq+++LEe+F+e+++L+p++K+ela +L+l++rqv+vWFqnrRARtk+kq+E+d+e Lk+++d+l+een+rL+ke +eL++ RDX57720.1 135 RKKLRLTKEQSSILEENFREHSTLNPKQKQELAMKLNLRARQVEVWFQNRRARTKLKQMETDCELLKKCCDTLTEENKRLQKELQELKS 223 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MSFHDTSNTG LGLGLGLGLV SFNDPSENCI KSTNDPLRES HKKKVENPPK CNKTYPSLTL 60 GPPDDDDEVN NQPSSKTESY EYFRPQGSSP SAVSSFSNSS SIKRERDQVL GEEFEVEGEK 120 LPTRVGDVDE DDNPRKKLRL TKEQSSILEE NFREHSTLNP KQKQELAMKL NLRARQVEVW 180 FQNRRARTKL KQMETDCELL KKCCDTLTEE NKRLQKELQE LKSMQTTSVP LYMQIPAATL 240 SICPSCERIT GGNNNSDSGN GSSHTTTLLI GSKTHHHFYQ SNYPFSHSSS ATC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	192	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-58	HD-ZIP family protein