PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20148.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 1366aa MW: 157161 Da PI: 7.6945

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54	5.6e-17	64	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GF +r+++sk++++ g ++ r +vC+++g + +++++++ +r r+++ +gC a++ + ke +w v+k+++ HnHel OVA20148.1 64 EYYSNFARKNGFAIRRESSKSNQDLG-VYIRLLVCYRSGALRIRRSAKSDGQRGRKSSVCGCMARMYIVKEVfggIPRWSVKKFSNVHNHELL 155 69*************999997777.9999*******9999999**************99998766679***********96 PP
2	FAR1	66.1	9.1e-21	744	835	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GF +r+++s+++++ g +++r fvC ++g ++++k+++ +++r r++t +gC+ak+ + k+ +w v+++ ++HnHel OVA20148.1 744 EYYTNFARKNGFAIRRESSRSNQDRG-VYSRVFVCHRYGPERHRKSAKAERKRDRKTTVCGCEAKMYILKKIiggVPRWSVKQFINDHNHELL 835 69*************999996666.****************99***************9988766779***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1366 aa Download sequence
MTTTKSPNGI NCWIRRQHCP CGEQKCYIRL EEEKSEELLS DSTNVDLAPP YVGQKFRTDD 60 DAFEYYSNFA RKNGFAIRRE SSKSNQDLGV YIRLLVCYRS GALRIRRSAK SDGQRGRKSS 120 VCGCMARMYI VKEVFGGIPR WSVKKFSNVH NHELLQDDQL RLLPAYRKIP DVYQERILLL 180 SKSGCSVSHI MKVLQSEKGG DSGQLPFLDR DVRNFLQSSK KIDRESDISE LLNFCKAAKE 240 RDINFLYDFT MDENAKVENI AWSYGDSFRA YKVFGDVVVF DATYHEITYD RLLGVWLGVD 300 NHGKTIFFGC AMLRDETSRS FKWALQAFLR FMQGRFPPTI VTDLDLGLKD AIISVLPNTK 360 HVFGIWHIVS KLPSWFSFPL GPRYDEFKSE FDRLYTLESR KDFESQWNPM VTRFGLGSNK 420 HISLLFSHRA SWALPYLRGY FLAQMMRTEY SKSIDSFLKG ILGAQTCLES FFEQVGIAAN 480 ISKQAEEKDT EDINIKTSMP IEEHASTILT PYAFSLLQSE VVLSMQCAAF ETAHGLYLVR 540 HHKNVDGGCL VSWMPKDEKV HCSCKEFEVS GILCRHALRV LALKNYFHIP EKYLPFRWRR 600 GSSIFHGNTD DWSQAFHSLT STLYAESSIT KERVQYVHGE LTRVLSYVRN MPANDEVALN 660 LECQPMDVRI HDDSNCSECN SSGNLFQLAT DGQPMEKRKR KCYIRFEDGK NDEASSSETT 720 VIVYVDVVPP YIGQTFETDD EAFEYYTNFA RKNGFAIRRE SSRSNQDRGV YSRVFVCHRY 780 GPERHRKSAK AERKRDRKTT VCGCEAKMYI LKKIIGGVPR WSVKQFINDH NHELLKDDQV 840 RLLPAYRKIP DADRERILLL HKAGCSVRHI MKVLQVEKGE EEQLSFIERD VRNFVQSCKR 900 IDRETDVSEL LNVCKTVRER DPDFVYDFTM DENAKLANIA WAYGDSVRAY RAFGDVVVFD 960 ATYREITYDR LLGVWFGIDN HGKTIFFGSV LLRDETCQSF AWALQAFLQF MQGRCPQTIL 1020 TDIDLGLGDA ITTVLPSTKH VFCIWHIVSK LSSWFSFQLG SQYEDFKSEF DRLYSLESKK 1080 DFEVQWSQMV NRFGLGSNKH ISLLFSHRAS WALPYLRGYF LAQMTTAEYS KSIDAFLKGI 1140 LSAQTCLESF FEQVGIVANF RTQAGEQEME DMHIKTSMPI EEHASSILTP YAFNLLQSEI 1200 VLSMQCAAFE TSNGSFLVRH HKKMDGGCLV SWIPKDEKIC CSCKQFEVSG ILCRHILRVL 1260 ALKNYFHLPE KYLPIRWRRE SSLIQSNTDG WSQAFNSLTS ALYAESSITK ERVDYVRREL 1320 TRVLNHVRNM PAIDGVALNL ESSPPIDARI DDVGNGSECN STWNSL

Sequence ? help Back to Top

Protein Sequence Length: 1366 aa Download sequence

MTTTKSPNGI NCWIRRQHCP CGEQKCYIRL EEEKSEELLS DSTNVDLAPP YVGQKFRTDD  60
DAFEYYSNFA RKNGFAIRRE SSKSNQDLGV YIRLLVCYRS GALRIRRSAK SDGQRGRKSS  120
VCGCMARMYI VKEVFGGIPR WSVKKFSNVH NHELLQDDQL RLLPAYRKIP DVYQERILLL  180
SKSGCSVSHI MKVLQSEKGG DSGQLPFLDR DVRNFLQSSK KIDRESDISE LLNFCKAAKE  240
RDINFLYDFT MDENAKVENI AWSYGDSFRA YKVFGDVVVF DATYHEITYD RLLGVWLGVD  300
NHGKTIFFGC AMLRDETSRS FKWALQAFLR FMQGRFPPTI VTDLDLGLKD AIISVLPNTK  360
HVFGIWHIVS KLPSWFSFPL GPRYDEFKSE FDRLYTLESR KDFESQWNPM VTRFGLGSNK  420
HISLLFSHRA SWALPYLRGY FLAQMMRTEY SKSIDSFLKG ILGAQTCLES FFEQVGIAAN  480
ISKQAEEKDT EDINIKTSMP IEEHASTILT PYAFSLLQSE VVLSMQCAAF ETAHGLYLVR  540
HHKNVDGGCL VSWMPKDEKV HCSCKEFEVS GILCRHALRV LALKNYFHIP EKYLPFRWRR  600
GSSIFHGNTD DWSQAFHSLT STLYAESSIT KERVQYVHGE LTRVLSYVRN MPANDEVALN  660
LECQPMDVRI HDDSNCSECN SSGNLFQLAT DGQPMEKRKR KCYIRFEDGK NDEASSSETT  720
VIVYVDVVPP YIGQTFETDD EAFEYYTNFA RKNGFAIRRE SSRSNQDRGV YSRVFVCHRY  780
GPERHRKSAK AERKRDRKTT VCGCEAKMYI LKKIIGGVPR WSVKQFINDH NHELLKDDQV  840
RLLPAYRKIP DADRERILLL HKAGCSVRHI MKVLQVEKGE EEQLSFIERD VRNFVQSCKR  900
IDRETDVSEL LNVCKTVRER DPDFVYDFTM DENAKLANIA WAYGDSVRAY RAFGDVVVFD  960
ATYREITYDR LLGVWFGIDN HGKTIFFGSV LLRDETCQSF AWALQAFLQF MQGRCPQTIL  1020
TDIDLGLGDA ITTVLPSTKH VFCIWHIVSK LSSWFSFQLG SQYEDFKSEF DRLYSLESKK  1080
DFEVQWSQMV NRFGLGSNKH ISLLFSHRAS WALPYLRGYF LAQMTTAEYS KSIDAFLKGI  1140
LSAQTCLESF FEQVGIVANF RTQAGEQEME DMHIKTSMPI EEHASSILTP YAFNLLQSEI  1200
VLSMQCAAFE TSNGSFLVRH HKKMDGGCLV SWIPKDEKIC CSCKQFEVSG ILCRHILRVL  1260
ALKNYFHLPE KYLPIRWRRE SSLIQSNTDG WSQAFNSLTS ALYAESSITK ERVDYVRREL  1320
TRVLNHVRNM PAIDGVALNL ESSPPIDARI DDVGNGSECN STWNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein