PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19709.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 626aa MW: 69416 Da PI: 6.5534

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.7e-08	561	615	1	46
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 +++WT eE+e l++avk+ ++ Wk I + Rt+ ++k++w++ OVA19709.1 561 KLPWTHEEEEMLKEAVKKASSKvnkniPWKIILDSGCkvfnESRTPSDLKDKWRN 615 689*********************999999887779999***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MKKKNRPGRT RVSKVPPKPS SLATRAFNVM ANLNYTQGCN GDHFASTEDS DHLSLAESFE 60 RSQKNVEETE RGTEPIIVDA EDDTMTSIVP ETPNSCDVDD GYNDKEAAPD KTEEATTLKE 120 KPISLNSPST WNWDLLEMSD STLRGRCIKC NEGGDQVLIC SGNGCLIGIH TCCLRCPPTF 180 DDVGNFYCPL CSYKRAVSEL HEVEKEAALA KEKVQLVRKS FSLFVSGSDK KESTERIHER 240 ELNQSRMDAD RNGCRTNRQH QESNEKNNFI GLAEDQQEAT TTTGCSNGNL GKETSLASER 300 NDILLTGEGD HAKQVGNHQW KSMEDQQEAV VAVGCSFGNL MVEKPHESKS CDTSLSRGKR 360 SKQVDYHHCK NIENQQEAVA AVGVSNGNLG VETSLISERN DASHGGDDAE QFDGHRCESV 420 VELRSRVGPS VSCGSDNVSC GEDLPLCSEF GNPLTQTKEN ETEMVVEHQH PKEGEQQMQV 480 EANIGFEYRN STCRETETVS VHAQRVTRST VSQPRVVDPV VKSPSNRSTK GKKTASSKSV 540 KSKKSARCPS NPALPNSRRK KLPWTHEEEE MLKEAVKKAS SKVNKNIPWK IILDSGCKVF 600 NESRTPSDLK DKWRNMAKEG SRARRR

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MKKKNRPGRT RVSKVPPKPS SLATRAFNVM ANLNYTQGCN GDHFASTEDS DHLSLAESFE  60
RSQKNVEETE RGTEPIIVDA EDDTMTSIVP ETPNSCDVDD GYNDKEAAPD KTEEATTLKE  120
KPISLNSPST WNWDLLEMSD STLRGRCIKC NEGGDQVLIC SGNGCLIGIH TCCLRCPPTF  180
DDVGNFYCPL CSYKRAVSEL HEVEKEAALA KEKVQLVRKS FSLFVSGSDK KESTERIHER  240
ELNQSRMDAD RNGCRTNRQH QESNEKNNFI GLAEDQQEAT TTTGCSNGNL GKETSLASER  300
NDILLTGEGD HAKQVGNHQW KSMEDQQEAV VAVGCSFGNL MVEKPHESKS CDTSLSRGKR  360
SKQVDYHHCK NIENQQEAVA AVGVSNGNLG VETSLISERN DASHGGDDAE QFDGHRCESV  420
VELRSRVGPS VSCGSDNVSC GEDLPLCSEF GNPLTQTKEN ETEMVVEHQH PKEGEQQMQV  480
EANIGFEYRN STCRETETVS VHAQRVTRST VSQPRVVDPV VKSPSNRSTK GKKTASSKSV  540
KSKKSARCPS NPALPNSRRK KLPWTHEEEE MLKEAVKKAS SKVNKNIPWK IILDSGCKVF  600
NESRTPSDLK DKWRNMAKEG SRARRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	6e-06	MYB_related family protein