PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19394.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 290aa MW: 32004.4 Da PI: 8.3348

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.6e-05	262	284	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ L++H + H OVA19394.1 262 VCPKCSRGFRDPVALVNHVEKdH 284 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGTPEFPDLG KHCSVEECKQ IDFLPFTCDR CNQVFCLQHR SFVKHHCPNA NKQDVTVVIC 60 PLCAKGVRLV PEEDPNITWE SHVDTECDPS NYEKATKKKK CPVPRCKEIL TFSNTIKCRD 120 CTIDHCLKHR FGPDHNCAGP KKPDSGFPFI DLFKRSQKEE RKTNRTPTAS SSSSSPTWAT 180 SFLNAASNVR ASAEAGMAKL SIATNQALQT AKDGMGQSSN GPMEECPQCR AKFSSVTALV 240 DHVEKVHERG SRGGVKKVTI DVCPKCSRGF RDPVALVNHV EKDHGGTSRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-128	C2H2 family protein