PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19324.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 464aa MW: 51519.2 Da PI: 7.7521

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.8	2.4e-41	184	261	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dl++ak+yhrrh+vCe hsk+p+v+vsgle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+ + OVA19324.1 184 RCQVEGCDLDLTSAKDYHRRHRVCESHSKCPKVTVSGLERRFCQQCSRFHDLSEFDEKKRSCRRRLSDHNARRRKPPQ 261 6**************************************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MKFCSVMEWN TKTPLQWDWE NLMMFNGKIN EIHKQTQPTD WGTEGDGAID NGSFYSSGGG 60 HSGSDLGNGS SSKSSISASI DSSAKGGIKI SEFNFETVEA SPKDPTRKKE LGRVEDTGSS 120 PTLGASVGSC EPLIGLKLGK RTYFEDVCAG SSTIKPSSFS VIPTSSTTAA KRSRASYQSM 180 QTPRCQVEGC DLDLTSAKDY HRRHRVCESH SKCPKVTVSG LERRFCQQCS RFHDLSEFDE 240 KKRSCRRRLS DHNARRRKPP QEAIQFNSAR LSSSFYDGRQ QMSFMLNRVP LVHSTKPATN 300 PTWERRPAKP GGIDAQHFPN SDLLNSIPSL RHDSDRLLPF KGPTVEALNQ GLEASMLAPN 360 LDPTPDLRRA LSLLSTNSWS SGDPEPSSLD QLMHANHTSL PQPDMQSTPQ GWPLASLEYW 420 QAEQQPADSR VHPLTSQNNG SSQFQEFQLF KTPYEDGFYS NQIN

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MKFCSVMEWN TKTPLQWDWE NLMMFNGKIN EIHKQTQPTD WGTEGDGAID NGSFYSSGGG  60
HSGSDLGNGS SSKSSISASI DSSAKGGIKI SEFNFETVEA SPKDPTRKKE LGRVEDTGSS  120
PTLGASVGSC EPLIGLKLGK RTYFEDVCAG SSTIKPSSFS VIPTSSTTAA KRSRASYQSM  180
QTPRCQVEGC DLDLTSAKDY HRRHRVCESH SKCPKVTVSG LERRFCQQCS RFHDLSEFDE  240
KKRSCRRRLS DHNARRRKPP QEAIQFNSAR LSSSFYDGRQ QMSFMLNRVP LVHSTKPATN  300
PTWERRPAKP GGIDAQHFPN SDLLNSIPSL RHDSDRLLPF KGPTVEALNQ GLEASMLAPN  360
LDPTPDLRRA LSLLSTNSWS SGDPEPSSLD QLMHANHTSL PQPDMQSTPQ GWPLASLEYW  420
QAEQQPADSR VHPLTSQNNG SSQFQEFQLF KTPYEDGFYS NQIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	258	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-71	SBP family protein