PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18881.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 656aa MW: 73349 Da PI: 6.5146

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	66	139	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY++YA++vGFs+r+ + +s+ +g++t+r+f Cske ++++ ++ C a+lk+++++ +kw+ tk+++eHnH+ OVA18881.1 66 FYDAYARQVGFSTRIGQCIRSEPDGTVTDREFACSKESLKRKNADS-------------CCSAMLKIERKDPNKWVATKFVKEHNHS 139 9**********************************999988777.............9************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MDVEVINVEE ENRAAANAPN AEACEGGDER TTENSLEKDL PSQDDDEIGE PHVGMEFESE 60 DAAKMFYDAY ARQVGFSTRI GQCIRSEPDG TVTDREFACS KESLKRKNAD SCCSAMLKIE 120 RKDPNKWVAT KFVKEHNHST MTPSKVHQLR SRRHFAGAAK NISETYQVGL DPGGAMYVPT 180 DGNHAFVGAN HSVRNVPPVE QNRAVRNSGP ILIRFAPRRT YRVAKFEDDH KSYTVTLNVP 240 EMRACCSCQM FEFSGILCRH VLTVFTVTNV LTLPSHYILK RWTRNAKSWV GSDEHGGEVQ 300 GEESLTIRYN SLCQEAIKYA EEGAIATETY NVAMGALREG GKKVSVVKKD IARVPRPSSQ 360 ISGSNQEDNN RKMPSDMSPS LWPRQEEENR RFNLNDARAP TSSVTDLNLP HMAPVSLHRD 420 DGLPDPDNMV VLPCLKSMTW VMENKTSAPA NRVAVINLKL QDYSKAPSGE SEVKFQLSSV 480 TLEPMLRSMA YISEQLSTPA NRVAVINLKL QDSETTSGES EVKFQVSRDT LGAMLRSMAY 540 IREQLANVAE PQSEPSKKQR NVLLTWNWNP LINLSSLVES RCSNFPSNKQ TATRPCSRAE 600 MVKVLFSSLD ISCQKILLLD YLLSDGCIMF HWMMKELVSV SSLVVEFTKE AKEIPS

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MDVEVINVEE ENRAAANAPN AEACEGGDER TTENSLEKDL PSQDDDEIGE PHVGMEFESE  60
DAAKMFYDAY ARQVGFSTRI GQCIRSEPDG TVTDREFACS KESLKRKNAD SCCSAMLKIE  120
RKDPNKWVAT KFVKEHNHST MTPSKVHQLR SRRHFAGAAK NISETYQVGL DPGGAMYVPT  180
DGNHAFVGAN HSVRNVPPVE QNRAVRNSGP ILIRFAPRRT YRVAKFEDDH KSYTVTLNVP  240
EMRACCSCQM FEFSGILCRH VLTVFTVTNV LTLPSHYILK RWTRNAKSWV GSDEHGGEVQ  300
GEESLTIRYN SLCQEAIKYA EEGAIATETY NVAMGALREG GKKVSVVKKD IARVPRPSSQ  360
ISGSNQEDNN RKMPSDMSPS LWPRQEEENR RFNLNDARAP TSSVTDLNLP HMAPVSLHRD  420
DGLPDPDNMV VLPCLKSMTW VMENKTSAPA NRVAVINLKL QDYSKAPSGE SEVKFQLSSV  480
TLEPMLRSMA YISEQLSTPA NRVAVINLKL QDSETTSGES EVKFQVSRDT LGAMLRSMAY  540
IREQLANVAE PQSEPSKKQR NVLLTWNWNP LINLSSLVES RCSNFPSNKQ TATRPCSRAE  600
MVKVLFSSLD ISCQKILLLD YLLSDGCIMF HWMMKELVSV SSLVVEFTKE AKEIPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-148	FAR1 family protein