PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18673.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 510aa MW: 53500.7 Da PI: 8.9731

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.1e-05	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OVA18673.1 67 FVCEICSKGFQRDQNLQLHRRGH 89 89*******************88 PP
2	zf-C2H2	14.9	7.9e-05	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ OVA18673.1 143 WKCDKCSKKYAVQSDWKAHLKTC 165 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MLVELENSSA MTVSTASGEA SVSSSGTQTA IPPSTTTKKK RNLPGMPDPN AEVIALSPKT 60 LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLRQRTS KEIRKRVYVC PEPSCVHHDP 120 SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HLKTCGTKEY KCDCGTLFSR 180 RDSFITHRAF CDALAEESAK AQTVTNSKSE EDNNQKHHQL VVGSSSSSSP PSSSAISVIQ 240 TSELPVNSTG ILHQNSPANH LNESNGSSSS NISSSNNSMF TSIFASSSSM VGNLQPQTSA 300 FSNLICAMAR SDRSTAVAST STPTTEPTSL SLSSKNGSSI FASTTTNGQE SRQFSPQPAM 360 SATALLQKAA QMGAAATSAS LLRGFGISMT SSSTGQQQPE NLQWNGGQIE DQQQQGRSGA 420 IAAGLGLGLP CNGGGWNEFM MGPSSIFGSK PTTLDLLGLG MGGGGAGGSG GGGGFSALIN 480 SMDGGLDMAT AAAAFRGVSS EGGGGQMSRE

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MLVELENSSA MTVSTASGEA SVSSSGTQTA IPPSTTTKKK RNLPGMPDPN AEVIALSPKT  60
LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLRQRTS KEIRKRVYVC PEPSCVHHDP  120
SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HLKTCGTKEY KCDCGTLFSR  180
RDSFITHRAF CDALAEESAK AQTVTNSKSE EDNNQKHHQL VVGSSSSSSP PSSSAISVIQ  240
TSELPVNSTG ILHQNSPANH LNESNGSSSS NISSSNNSMF TSIFASSSSM VGNLQPQTSA  300
FSNLICAMAR SDRSTAVAST STPTTEPTSL SLSSKNGSSI FASTTTNGQE SRQFSPQPAM  360
SATALLQKAA QMGAAATSAS LLRGFGISMT SSSTGQQQPE NLQWNGGQIE DQQQQGRSGA  420
IAAGLGLGLP CNGGGWNEFM MGPSSIFGSK PTTLDLLGLG MGGGGAGGSG GGGGFSALIN  480
SMDGGLDMAT AAAAFRGVSS EGGGGQMSRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-105	C2H2 family protein