PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18595.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 264aa MW: 28515.5 Da PI: 8.2562

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.8	9.3e-44	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll+++ +++reda++sl+yeAear+rdPvyG+vgvi+ lq++l+q++ +l +k+ OVA18595.1 8 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNEITPTQREDAVNSLAYEAEARLRDPVYGCVGVISILQHKLKQVQLDLFNAKK 106 7******************************************************************************************99988777 PP DUF260 100 e 100 e OVA18595.1 107 E 107 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MASSSNSPCA ACKFLRRKCT QECVFAPYFP PDQPQKFANV HKVFGASNVA KLLNEITPTQ 60 REDAVNSLAY EAEARLRDPV YGCVGVISIL QHKLKQVQLD LFNAKKELST YIGPSAMLPL 120 THQHPHHHPL LHHPQNPNSP MGHPFGISSL GLGLPTGPSH QSQLLIREQQ QHQQILDAQH 180 LAAVVAAREQ DMMRNYEQQQ QELVRFNSGG FDATGGTAGT GGGGGGVGGG FNQMSAALPS 240 QLSLVGNLPF PMASLIISIF RVLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	8e-69	LBD family protein