PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18370.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 954aa MW: 105826 Da PI: 5.6386

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.7	4.7e-07	891	944	2	46
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg.....kgRtlkqcksrwqk 46 +W++eE+e+l+++v ++ ++ Wk+I ++g k Rt ++k++w++ OVA18370.1 891 TAWSAEEEEILKEGVFRFASHdgktvPWKKIR-EFGshvflKSRTTIDLKDKWRN 944 68***************99999**95.5555**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MMMDAGKAIT PPPSSSDHLP WLWVIESLSD SKLVVDPSLL HDLISKASEL TTDDSFIENV 60 RERLALNQLE DLLCGPSTSK STAAAVADAI PSNATLNSES HSKVGIDVSD RAQDVLRLLH 120 DNMETSNMRI SMLDSLKWDV HQFILHKRAG LPKCDLRQLK SAILEGVDPS ASLLREMAGL 180 GKEDQLVKIP VDVDVPNAAI LEADNSSAEI FRQRSRLEKV DQQDHRIPVN VGDPNTAAGK 240 CDENMNDLEI QSSKEHSCHL GPENGNQLLL EDSCGKDLIS MRKESPEQNH NQCLGECRMG 300 LDTVNNAAEG LEQSLKYDEV HSKNQNSVPL APENMKEIVQ ETPPDSSLIS SKKERSCFSK 360 KELVHCVGKG TFCGERGDQQ PGPKDLNNNV ELKSLRQNST SLHGNEPVQD PSGRNLSSVD 420 KEVSDSAKGI RVHDLQGDGN LVHDGDGFEC VSLKRLKQGI NDCQIQHNLS HCPSSDGVIP 480 EEAHLDGHHQ NNYINESKVD SESRTKPGTS SSYDRNLDKA PTFDSDEEMV IAAEKHSFLS 540 SQSTFNQDSQ ATAGWTEGSI CIKCNEGGQL LTCCVSSCPL AVHESCVGSS FSVSDSGKFY 600 CPFCSYVQAI ASHRETKKKA ALVKKKVALA RNHLSEFMCM VNAQRQQQPS ELAPSEELIN 660 SRMVEDTNFL NDIHGSRLQR EIINNQPMQA AVSQQEAEVA LECINSLPSR GDAPKSPLSD 720 RNAAKARGEV HWKQVIGHKN QRLVEDEELA EPCTAHHSDD LPQRVEETTL NCENTLNVLL 780 SEEREKAEMN EDQPYVSEES KHVKAHRKGK TVKSSCRYAE TASIHQEHAD VEKEIEDWQY 840 TADPHQGPSC QRNVNADKVA ENQNDDGISS GSRRRARVAT QHSNWERRKK TAWSAEEEEI 900 LKEGVFRFAS HDGKTVPWKK IREFGSHVFL KSRTTIDLKD KWRNIWSKGG GRRG

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MMMDAGKAIT PPPSSSDHLP WLWVIESLSD SKLVVDPSLL HDLISKASEL TTDDSFIENV  60
RERLALNQLE DLLCGPSTSK STAAAVADAI PSNATLNSES HSKVGIDVSD RAQDVLRLLH  120
DNMETSNMRI SMLDSLKWDV HQFILHKRAG LPKCDLRQLK SAILEGVDPS ASLLREMAGL  180
GKEDQLVKIP VDVDVPNAAI LEADNSSAEI FRQRSRLEKV DQQDHRIPVN VGDPNTAAGK  240
CDENMNDLEI QSSKEHSCHL GPENGNQLLL EDSCGKDLIS MRKESPEQNH NQCLGECRMG  300
LDTVNNAAEG LEQSLKYDEV HSKNQNSVPL APENMKEIVQ ETPPDSSLIS SKKERSCFSK  360
KELVHCVGKG TFCGERGDQQ PGPKDLNNNV ELKSLRQNST SLHGNEPVQD PSGRNLSSVD  420
KEVSDSAKGI RVHDLQGDGN LVHDGDGFEC VSLKRLKQGI NDCQIQHNLS HCPSSDGVIP  480
EEAHLDGHHQ NNYINESKVD SESRTKPGTS SSYDRNLDKA PTFDSDEEMV IAAEKHSFLS  540
SQSTFNQDSQ ATAGWTEGSI CIKCNEGGQL LTCCVSSCPL AVHESCVGSS FSVSDSGKFY  600
CPFCSYVQAI ASHRETKKKA ALVKKKVALA RNHLSEFMCM VNAQRQQQPS ELAPSEELIN  660
SRMVEDTNFL NDIHGSRLQR EIINNQPMQA AVSQQEAEVA LECINSLPSR GDAPKSPLSD  720
RNAAKARGEV HWKQVIGHKN QRLVEDEELA EPCTAHHSDD LPQRVEETTL NCENTLNVLL  780
SEEREKAEMN EDQPYVSEES KHVKAHRKGK TVKSSCRYAE TASIHQEHAD VEKEIEDWQY  840
TADPHQGPSC QRNVNADKVA ENQNDDGISS GSRRRARVAT QHSNWERRKK TAWSAEEEEI  900
LKEGVFRFAS HDGKTVPWKK IREFGSHVFL KSRTTIDLKD KWRNIWSKGG GRRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	873	890	RRRARVATQHSNWERRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-06	MYB_related family protein