PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18183.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 507aa MW: 55718 Da PI: 7.3066

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.2	4.2e-13	276	326	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g OVA18183.1 276 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEIEAARAYDKAAIKCNG 326 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MLDLNIAVSE DSTTCDEEEI MMVKVRESSG RGQVDDSGTS NSSVVNAEAA ASSNGGEEDS 60 CSTHTKRTRS DDLLVFNFDI LKKKDVGSKI TAAVEDDVEG NLTLFQSSFV TKQLFPVSDG 120 DGSGGFNLVF PSLDSSSSRS HWIDLSSRHV IGGGKPEVKV VQQQQPQQQQ QQPKKSRRGP 180 RSRSSQYRGV TFYRRTGRWE SHIWLVLSVL IEFLSFGFSD FRAYDRAAIK FRGVEADINF 240 NLSDYDEDLK QMTNLTKEEF VHILRRHSTG FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK 300 YIYLGLFDNE IEAARAYDKA AIKCNGREAV TNFEPSTYAG EIIPKIHNGG TNDELDLNLG 360 ISTPSLADGR CVSNGVAGFQ FSYSPFGIHD AKRARTDNPA SATQRVQPLN GRAMASEYPP 420 FWIGISPSLF PNYEERTTAR KVEVGLPVLA NGSSQTNGSN VPTTTMPLLS AAASSGFSSS 480 ATIASSAAFP PPHPPNINTT SDYYRRI

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MLDLNIAVSE DSTTCDEEEI MMVKVRESSG RGQVDDSGTS NSSVVNAEAA ASSNGGEEDS  60
CSTHTKRTRS DDLLVFNFDI LKKKDVGSKI TAAVEDDVEG NLTLFQSSFV TKQLFPVSDG  120
DGSGGFNLVF PSLDSSSSRS HWIDLSSRHV IGGGKPEVKV VQQQQPQQQQ QQPKKSRRGP  180
RSRSSQYRGV TFYRRTGRWE SHIWLVLSVL IEFLSFGFSD FRAYDRAAIK FRGVEADINF  240
NLSDYDEDLK QMTNLTKEEF VHILRRHSTG FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK  300
YIYLGLFDNE IEAARAYDKA AIKCNGREAV TNFEPSTYAG EIIPKIHNGG TNDELDLNLG  360
ISTPSLADGR CVSNGVAGFQ FSYSPFGIHD AKRARTDNPA SATQRVQPLN GRAMASEYPP  420
FWIGISPSLF PNYEERTTAR KVEVGLPVLA NGSSQTNGSN VPTTTMPLLS AAASSGFSSS  480
ATIASSAAFP PPHPPNINTT SDYYRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	2e-85	AP2 family protein