PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA18075.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 838aa    MW: 92077.2 Da    PI: 6.0753
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA18075.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.66.4e-112572447
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHH CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvW 47
                  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvW
  OVA18075.1 25 YVRYTAEQVEALERVYAECPKPSSMRRQQLIRECpilcNIEPKQIKVW 72
                5789******************************************** PP
2START160.31.5e-501583632202
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+ + +++g++++ +++ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l+++++
  OVA18075.1 158 IAEETLAEFLSKATGTAVDWVQIPGMKPGPDSVGIVAISHNCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELIYMQM 255
                 7899******************************************************.7777777777***********999999999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+++Ry+ +l++g++v++++S++     p+     ++vRae+lpSg+li+p+++g+s +++v+h dl++++++++lr+l++s+ + ++
  OVA18075.1 256 YAPTTLAPaRDFWTLRYTTSLEDGSLVVCERSLSGSGTGPNasaATQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLDLEAWSVPEVLRPLYQSSKVIAQ 354
                 **********************************9888888788899**************************************************** PP

                 HHHHHHTXX CS
       START 194 ktwvatlqr 202
                 k++ ++l++
  OVA18075.1 355 KMTISALNH 363
                 ****99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MAMVVMPHRE SSSGSINRHL DAGKYVRYTA EQVEALERVY AECPKPSSMR RQQLIRECPI  60
LCNIEPKQIK VWCREKQRKE ASRLQTVNRK LTAMNKLLME ENERLQKQVS QLVYENAYMR  120
QQLQNASAAT TDASCESVVT TPQHSLRDAN NPAGLLSIAE ETLAEFLSKA TGTAVDWVQI  180
PGMKPGPDSV GIVAISHNCS GVAARACGLV SLEPTKIAEI LKDRPSWFRD CRSLEVFTMF  240
PAGNGGTIEL IYMQMYAPTT LAPARDFWTL RYTTSLEDGS LVVCERSLSG SGTGPNASAA  300
TQFVRAEMLP SGYLIRPCEG GGSIIHIVDH LDLEAWSVPE VLRPLYQSSK VIAQKMTISA  360
LNHIRQVAQE TSGEVVYGLG RQPAVLRTFS QRLSRGFNDA VNGFNDDGWS LMNCDGAEDV  420
IMAVNTTKNV GTSNAPTNIL PLPGGVLCVK ASMLLQNVPP ALLVRFLREH RSEWADYNID  480
AYSAASVKSG AYSFPGLRST RFSGSQIIMP LGHTVEHEEL LEVIRLEGHA LTQEEAILSR  540
DIHLLQICSG VDENAVGACS ELVFAPIDEM FPDDAPLLPS GFRIIPLDSK RDTPTSHRTL  600
DLASSLEVGP GTNRVAGDTS QSTSSTRSVL TIAFQFPFEF HLREDVATMA RQYVRSVLSS  660
VQRVAMAIAP SGLGPHLGPK LSPSSPEALT LAHWICRSYR QVDIFYHIGA ELLRSDCEGG  720
ESILKLLWHH QDAILCCSLK SLPVFSFANQ AGLDMLETTL VALQDITLDK IFDESGKKSL  780
CADFAKIMEQ GFAYLPGGIC VSTMGRHISY EQAVAWKVLA EEDTVHCLAF TFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein