PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA18032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | TCP | ||||||||
Protein Properties | Length: 219aa MW: 23564.4 Da PI: 5.5946 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 113.5 | 2.9e-35 | 32 | 132 | 5 | 88 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasec...eaessss 80 +++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++ti+WLl+qa+p+i+++tgt + ++ssss OVA18032.1 32 RRTSKDRHTKVNGRGRRVRIPALCAARIFQLTRELGHSSDGETIDWLLRQAEPSIIAATGTgvtpaacdtgpfpspsppppP------PpppPPHSSSS 124 6789*********************************************************766666666666554332220......12323333333 PP TCP 81 sasnsssg 88 + s+sss+ OVA18032.1 125 TPSSSSSP 132 33333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MDSEFNFTDH QPNPISAIPP TDSSKTNQLA IRRTSKDRHT KVNGRGRRVR IPALCAARIF 60 QLTRELGHSS DGETIDWLLR QAEPSIIAAT GTGVTPAACD TGPFPSPSPP PPPPPPPPPH 120 SSSSTPSSSS SPSAPFKAPE LVQVMPENPD LSGFLPVSRF ESPSPLNCRL DLGQPLGLDF 180 SIGDAYRHMP FTTMLLQAAN GGDGEEQQQL PLQVFNEQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 6e-35 | TCP family protein |