PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17938.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 437aa MW: 48461.6 Da PI: 8.3386

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.2	3.8e-07	268	290	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H OVA17938.1 268 HYCQVCGKGFKRDANLRMHMRAH 290 68*******************99 PP
2	zf-C2H2	11	0.0013	363	386	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + OVA17938.1 363 YVCNRCNqKQFSVLSDLRTHEKHC 386 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MIPGSSNSCF QNGSSQQANH HLQMYGVADD VLSASSLDQT SSSTINADQS HSNAILYSLS 60 VLKEKVHQVQ TLVNVAVVAP NQGVVQPAES VSIAIAGMGT LIQEIIVTAS SMMFTCQQLA 120 LAAANSPNLN NGSHELHQLW RSTTVHNKVN PDHVGLSSQL SHDHHPTTVN QHGLGSENGG 180 RGGFFSDEPL DWYGDNYNNH NSVHDGNTTT IINTINNSNN NNKKKKMMVG EMGLLHEVEN 240 KESLNGLSPI NYEIIELDAA DLLAKYTHYC QVCGKGFKRD ANLRMHMRAH GDEYKSSAAL 300 SNPMKNSNGS MGSKEFYSKL LPRKYSCPQE GCRWNKKHPK FQPLKSMICV KNHYKRSHCP 360 KMYVCNRCNQ KQFSVLSDLR THEKHCGDLK WQCSCGTTFS RKDKLLGHCA LFFGHTPAGI 420 SLPKQERFDL HTELNVR

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MIPGSSNSCF QNGSSQQANH HLQMYGVADD VLSASSLDQT SSSTINADQS HSNAILYSLS  60
VLKEKVHQVQ TLVNVAVVAP NQGVVQPAES VSIAIAGMGT LIQEIIVTAS SMMFTCQQLA  120
LAAANSPNLN NGSHELHQLW RSTTVHNKVN PDHVGLSSQL SHDHHPTTVN QHGLGSENGG  180
RGGFFSDEPL DWYGDNYNNH NSVHDGNTTT IINTINNSNN NNKKKKMMVG EMGLLHEVEN  240
KESLNGLSPI NYEIIELDAA DLLAKYTHYC QVCGKGFKRD ANLRMHMRAH GDEYKSSAAL  300
SNPMKNSNGS MGSKEFYSKL LPRKYSCPQE GCRWNKKHPK FQPLKSMICV KNHYKRSHCP  360
KMYVCNRCNQ KQFSVLSDLR THEKHCGDLK WQCSCGTTFS RKDKLLGHCA LFFGHTPAGI  420
SLPKQERFDL HTELNVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-105	C2H2 family protein