PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17794.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GeBP

Protein Properties

Length: 386aa MW: 44016.3 Da PI: 4.5137

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	116.1	2e-36	143	237	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +qrlwse+Deiv+L+G++++ +k+g p +d++af ef+k+s++++v+k+ql++Ki+rLK+Kf+ ++ k k+g+e sf+k+hd k+felskkiWg OVA17794.1 143 SSQRLWSENDEIVILKGMLNY-MKKGLIPNADMNAFLEFIKDSLHVDVNKDQLFNKIKRLKQKFQSNEMKEKKGEELSFAKPHDAKSFELSKKIWG 237 68*****************.99*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MPPKRRSTLL ENPPAASSSE EEEKIEEEVN DEDREEVEEE VDDEDIEEEE EEEVEEEADE 60 DDEDEETIKS RFSIKKYDAV SSLKPQSSSM DEGSGSDSEN PKLKKTTVTP SKRPTSVKSP 120 INADKSEKRR KKTHDIEETE KKSSQRLWSE NDEIVILKGM LNYMKKGLIP NADMNAFLEF 180 IKDSLHVDVN KDQLFNKIKR LKQKFQSNEM KEKKGEELSF AKPHDAKSFE LSKKIWGEKD 240 VKVEKDVKVE ELEEKIGGVD SVTEGGKSSR NPKDSNGVVS SKLDTIAKPD FTPQVESVVK 300 EENSLLKYFS LYELMQYGKD LIRPPSSLGE FVGIEGLELI GGSKVKDLEQ KWMKLMIAET 360 KVYLNRIELL KEHAKMVLDV LESSNS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MPPKRRSTLL ENPPAASSSE EEEKIEEEVN DEDREEVEEE VDDEDIEEEE EEEVEEEADE  60
DDEDEETIKS RFSIKKYDAV SSLKPQSSSM DEGSGSDSEN PKLKKTTVTP SKRPTSVKSP  120
INADKSEKRR KKTHDIEETE KKSSQRLWSE NDEIVILKGM LNYMKKGLIP NADMNAFLEF  180
IKDSLHVDVN KDQLFNKIKR LKQKFQSNEM KEKKGEELSF AKPHDAKSFE LSKKIWGEKD  240
VKVEKDVKVE ELEEKIGGVD SVTEGGKSSR NPKDSNGVVS SKLDTIAKPD FTPQVESVVK  300
EENSLLKYFS LYELMQYGKD LIRPPSSLGE FVGIEGLELI GGSKVKDLEQ KWMKLMIAET  360
KVYLNRIELL KEHAKMVLDV LESSNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	134	KRRKKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	2e-23	GeBP family protein