PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17390.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 338aa    MW: 38348 Da    PI: 6.5338
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-09177224455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  OVA17390.1 177 SHSLAERVRREKISERMKLLQSLVPGC----DKVTGKALMLDEIINYVQSLQ 224
                 8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MAAFSYLHPT LFLDSAGFLP NTPIKMSGSL EEGDINTSSC FSYYPSEEPL QEIDVRFHEN  60
SIRSLPSDNE PSLLTDQKYN SDSSSMVIEV NDGDQQIIQK ETKKTEKRRK KSREGSCLST  120
GQSKDLKETK TKKQKKCDGK SKETEEKKSK AEKKSPTEEA PTGYIHVRAR RGQATDSHSL  180
AERVRREKIS ERMKLLQSLV PGCDKVTGKA LMLDEIINYV QSLQNQVEFL SMKLASVNPV  240
FYDFAVDLDA FMVKSEKLDS LASPLPSIQQ YSSTQLTSFA DTTTTTFTTR NDYPLLQLQQ  300
GQRPNNFPQV NENLLLDVDD QKQRSINQSW FNQFCSFQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107135KRRKKSREGSCLSTGQSKDLKETKTKKQK
2108136KRRKKSREGSCLSTGQSKDLKETKTKKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-51bHLH family protein