PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA17113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26365.3 Da PI: 4.5357 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.8 | 1.2e-05 | 185 | 224 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+ R+++++ + Lr ++P + ++ a++L +Av+Y+ksL OVA17113.1 185 ERK-RQKMKEMMKALRGIVPGgD------QMNSAAVLDEAVKYLKSL 224 555.69**************955......8***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MQSDQNFYNR NAVPPLSYQV GGGYINAPMA PTLPPCAKQL RPFNGVELQP FEVCPRNFII 60 VDQTDNRSRI MFHPALAEKF NYPDFDVQDN GMMKDTAAGT GTENRESSYP MKEDTEDINV 120 LLSLDGEEEE EEEDEDEEEV STARTLGSSG SSSPDSCSTY GSRPSKVRLS SSTQKSFSCS 180 SSKSERKRQK MKEMMKALRG IVPGGDQMNS AAVLDEAVKY LKSLKVEVKK LGIGNFND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 6e-19 | bHLH family protein |