PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA17105.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 291aa    MW: 31568.9 Da    PI: 7.4655
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA17105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00073121143123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k F +   L  H  +H
  OVA17105.1 121 YKCSVCNKAFASYQALGGHKASH 143
                 9**********999998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MALEAATLIT SSSRTIITTT PPNSFHHDYY EDIMSSDNLN YLDHDDQAPW MKRKRSKRPG  60
RSTLLLQNNN INQPSTEEEY LALCLIMLAQ DRTSSSFTTT TTRDTSPPPQ PPTTALKVLN  120
YKCSVCNKAF ASYQALGGHK ASHRSKSIII APSSSSDDHH HHQSTATATT TTNRNPSGTV  180
GVGRIHECSI CHKCFPSGQA LGGHKRCHYD GGSSGVTSSS SSSSSDGAAG STHLLLHDTQ  240
THNHHRDFDL NLPAPLPDFL PTNTTATCGD DEAQSPLTVK KPRLSVVDLF N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15158MKRKRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.25e-36C2H2 family protein