PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA16071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 251aa MW: 28522.5 Da PI: 8.4938 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.5 | 4.8e-13 | 124 | 157 | 23 | 56 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRakek 56 r s+++++ LAk+l+L rqV vWFqNrRa+ k OVA16071.1 124 RIFSRKQKQALAKRLNLRPRQVEVWFQNRRARTK 157 56799***************************98 PP | |||||||
2 | HD-ZIP_I/II | 88.6 | 7.5e-29 | 118 | 190 | 16 | 88 |
HD-ZIP_I/II 16 esFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 e+ e+e+ + ++K++la++L+l+prqv+vWFqnrRARtk+kq+E d+e++k+++++l+een+rL+ke +eL+ OVA16071.1 118 EEVETERIFSRKQKQALAKRLNLRPRQVEVWFQNRRARTKLKQTEIDCEFMKKCCEKLTEENRRLQKELQELK 190 45667778899************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGFGDVCNTG LSLGLGYELR LEESVLKSDH HDHQHQKSFF KFNQMFNPSI TTPTTSLEPS 60 LTLGLLDETY ELAAGNKMDM KKAHEESIDH VHRQSSPHNT VSSFSNTSVK REKDLVSEEV 120 ETERIFSRKQ KQALAKRLNL RPRQVEVWFQ NRRARTKLKQ TEIDCEFMKK CCEKLTEENR 180 RLQKELQELK GIKLGPPLYM QLPASALTMC PSCERINGGG VGENSSKTPF SMMAPKSNFF 240 NPFSHPPSAA C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 160 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 4e-57 | HD-ZIP family protein |