PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15580.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 344aa    MW: 38479.8 Da    PI: 8.2453
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.8e-057799123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ Cg+ F++   L  H+++H
  OVA15580.1 77 YSCSFCGREFRSAQALGGHMNVH 99
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MSTGSTATTT TTTGVIEQAR YWMWMMKRKL GEKPYVHSNY SSAATCFKED DSNWEEQAFA  60
EDSAGPLGGF IWPPRSYSCS FCGREFRSAQ ALGGHMNVHR RDRARLKESP MTTSPENRNH  120
RQHHDHPHQN HHQKPYTTVG LQQYSSSSSS HDDDDRVCTV LYNSNPSIVS LTLPTQKICK  180
ETSLVSLSCS SPTIVHEEKQ KAAGSSLLSL DLPCSDPVAV SRVLSSTSTT TPTTTDHVSP  240
SKLKNSRAHD QIGLIHQASK EDNIGRPGLA LVSLYPNRPT GLSNSNEEKY IKRRRRDVSL  300
PLSLKKGSVE HHDHDQWYHC FHKVNGLNPS SMEELDLELR LGAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.19e-25C2H2 family protein