PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14017.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 706aa MW: 79083.5 Da PI: 7.3009

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	85	106	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHir+H OVA14017.1 85 KCDKCAREFCSPINYRRHIRVH 106 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MSVAKVRSCN SLDAMKSGQK IGMPDEGNDS LDNFIRQAIG KEPVLSFSKA DDIPVQWIQL 60 LSSLNPQVAD LSGWPLLSPK VPMQKCDKCA REFCSPINYR RHIRVHRRSL KIDKDSTKLR 120 DFLGAFWDKL SLDEAKEIVS FNNVMLEEVP GSSIVRALTS FIRKPGFFSL PQSYVKAGAA 180 LLDLIQARPS RFPISSEEFF TILDDASEKT FLFPGTAVSM QKFMFDGEPG KIGLEMKNLI 240 ACTSFLVEQK LVREWLVDKD AEALRCQKLL VEEEEAAQKR QIELLERRRL KKLRQKEQKA 300 KEQVDEEESD LKEASSDSLE VSPSFTSLAI QQATSNSKSH ILESLSTVQS FLDPVLLPDT 360 DEEGFNNADI DMASDTANST NHQNFDHHRL QQGSGQRRTR RPQPSSQRGE QNGFHSGHAL 420 PVSKLGAIQK RGMYRDHRAT SLSNSHKVWT RKTKLDNERE DLNGRVRKES RDIPVQDDNC 480 ELLIGSISVT LGDCSSSQFK VDIDHQPPRQ SIIIQEKPVK PDSGQNGINR SKMKLWRPVG 540 RHEVGISMAA QSEKKDAEEE IHTPVDKNCV PCDASDGCSA LDRMDSSTVL EEADPRGLRL 600 FSSRAAEAFL AQRWKEAIAA DHVKLVLSPE AEPPGCPENQ EDAQVVAPIS SSDCCNRSIL 660 CSAENRLAAV NSLERTNTGP IKVAKFRAKP ERGYKLKYIP KQRNFT

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MSVAKVRSCN SLDAMKSGQK IGMPDEGNDS LDNFIRQAIG KEPVLSFSKA DDIPVQWIQL  60
LSSLNPQVAD LSGWPLLSPK VPMQKCDKCA REFCSPINYR RHIRVHRRSL KIDKDSTKLR  120
DFLGAFWDKL SLDEAKEIVS FNNVMLEEVP GSSIVRALTS FIRKPGFFSL PQSYVKAGAA  180
LLDLIQARPS RFPISSEEFF TILDDASEKT FLFPGTAVSM QKFMFDGEPG KIGLEMKNLI  240
ACTSFLVEQK LVREWLVDKD AEALRCQKLL VEEEEAAQKR QIELLERRRL KKLRQKEQKA  300
KEQVDEEESD LKEASSDSLE VSPSFTSLAI QQATSNSKSH ILESLSTVQS FLDPVLLPDT  360
DEEGFNNADI DMASDTANST NHQNFDHHRL QQGSGQRRTR RPQPSSQRGE QNGFHSGHAL  420
PVSKLGAIQK RGMYRDHRAT SLSNSHKVWT RKTKLDNERE DLNGRVRKES RDIPVQDDNC  480
ELLIGSISVT LGDCSSSQFK VDIDHQPPRQ SIIIQEKPVK PDSGQNGINR SKMKLWRPVG  540
RHEVGISMAA QSEKKDAEEE IHTPVDKNCV PCDASDGCSA LDRMDSSTVL EEADPRGLRL  600
FSSRAAEAFL AQRWKEAIAA DHVKLVLSPE AEPPGCPENQ EDAQVVAPIS SSDCCNRSIL  660
CSAENRLAAV NSLERTNTGP IKVAKFRAKP ERGYKLKYIP KQRNFT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	293	ERRRLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-127	C2H2 family protein