PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13919.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 473aa MW: 52769.3 Da PI: 8.9629

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.7	4.7e-07	9	44	2	38
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 ++W t+E++ll av ++G++ W+++a+++ Rtl+ OVA13919.1 9 MNWGTWEELLLGGAVLRHGTRAWDAVASELR-SRTLY 44 58***************************.*87 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MSETEMMVMN WGTWEELLLG GAVLRHGTRA WDAVASELRS RTLYPFCFTA EVCKAKYKDL 60 RKRYCGCNSA WFEELRKQRV TELKRELEKS DDSIGSLETK IESLKAEKVE DQNAKYDSSR 120 TESPVSDGST EGVGFSGKET SNSKDGLSAG SFTEETRTIW TPESQIPATV SNQETDIIIK 180 TEERENTTNV ETIGGDRISN LRKRRGKRKR KDCSSKEVNN KDEVSVGDSD VLSTADAAAL 240 MVDAQDHNSG DCDPTVEKEE DDLDLMKILN LFVEDENAAV FRCRLDSQKR AKYKKTIRCH 300 VDFNTIRSRI NNRSITSSRE LYRDLLLLSN NALVFYPKNT REYISAICVR DLASKTFRQD 360 RSLSGRDSGG AGPAGGGAVS DEPPPCNPPV KPRSIRPRIR KVAAKVVAVE ETPPKRENKK 420 DCDVEIIPAE SSPEEVVVKK VAGRTGKVGG GGGGSGRKRS ETPVKRRKRT RRR

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MSETEMMVMN WGTWEELLLG GAVLRHGTRA WDAVASELRS RTLYPFCFTA EVCKAKYKDL  60
RKRYCGCNSA WFEELRKQRV TELKRELEKS DDSIGSLETK IESLKAEKVE DQNAKYDSSR  120
TESPVSDGST EGVGFSGKET SNSKDGLSAG SFTEETRTIW TPESQIPATV SNQETDIIIK  180
TEERENTTNV ETIGGDRISN LRKRRGKRKR KDCSSKEVNN KDEVSVGDSD VLSTADAAAL  240
MVDAQDHNSG DCDPTVEKEE DDLDLMKILN LFVEDENAAV FRCRLDSQKR AKYKKTIRCH  300
VDFNTIRSRI NNRSITSSRE LYRDLLLLSN NALVFYPKNT REYISAICVR DLASKTFRQD  360
RSLSGRDSGG AGPAGGGAVS DEPPPCNPPV KPRSIRPRIR KVAAKVVAVE ETPPKRENKK  420
DCDVEIIPAE SSPEEVVVKK VAGRTGKVGG GGGGSGRKRS ETPVKRRKRT RRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	212	RKRRGKRKRKD
2	204	214	RKRRGKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	5e-24	MYB_related family protein