PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13818.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | C2H2 | ||||||||
Protein Properties | Length: 382aa MW: 44212.2 Da PI: 7.756 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.8 | 1e-06 | 64 | 85 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ + +Lk+H+++H OVA13818.1 64 TCEECGASFRKPAYLKQHMQSH 85 6*******************99 PP | |||||||
2 | zf-C2H2 | 17.9 | 8.6e-06 | 91 | 115 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dC+ s++rk++L+rH+ H OVA13818.1 91 FICPidDCHSSYRRKDHLTRHLLQH 115 78*******************9887 PP | |||||||
3 | zf-C2H2 | 12.7 | 0.00039 | 120 | 145 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp +C+ +F k n+krH H OVA13818.1 120 FSCPveNCNHRFAYKGNMKRHVEElH 145 89*******************98777 PP | |||||||
4 | zf-C2H2 | 15.4 | 5.2e-05 | 161 | 185 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ Cgk F+ s L++H +H OVA13818.1 161 HICQeiGCGKAFNFASKLRKHEESH 185 679999***************9988 PP | |||||||
5 | zf-C2H2 | 19.3 | 3e-06 | 264 | 288 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C ++F++ksnL++Hi++ H OVA13818.1 264 KCSfeGCLYTFTTKSNLNQHIKSvH 288 688889****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MEMEGEGKKV PIFRDIRRYY CEFCGICRVL NGCICSLFNT HPYEEMEEKS IDASEEKEES 60 KSNTCEECGA SFRKPAYLKQ HMQSHSLERP FICPIDDCHS SYRRKDHLTR HLLQHQGKLF 120 SCPVENCNHR FAYKGNMKRH VEELHDDEGS SSCDSEGQKQ HICQEIGCGK AFNFASKLRK 180 HEESHGKFLL CSISLNNFKL DSVEAICCEP DCMKHFTNVE CLKAHIQSCH QHVLCEICGT 240 KQLKKNIKRH MRIHENGGAS ERIKCSFEGC LYTFTTKSNL NQHIKSVHLE LRPFACRVPE 300 CGKKFPFKHV RDNHEKSGCH VYIHGDFEEA DEQFRSRPRG GRKRTYPTVE TLLRKRVVPP 360 SQTDSILSQG SEYLAWLLNS ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-102 | C2H2 family protein |