PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13344.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 407aa MW: 43466.8 Da PI: 7.2312

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.3	6.4e-39	65	174	1	89
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 +a+k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s++ OVA13344.1 65 PAPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSTISAPsqlmrntyfn 163 589*******************************************************************99976777777766444444444444444 PP TCP 89 ..........k 89 + OVA13344.1 164 pnfvtpqlrmR 174 44444444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDGESNIRWP NFPLQLLEKK EEAAEDLSSS RSGYPSVAAE TSTIGSNSSS HLQTTADHQA 60 LVKKPAPKRA STKDRHTKVD GRGRRIRMPA ACAARVFQLT KELGHKSDGE TIEWLLQQAE 120 PSVIAATGTG TIPANFTSLN ISLRSSGSTI SAPSQLMRNT YFNPNFVTPQ LRMRSEWERN 180 IDESSQRQIC FAGGGYSSES SSSNLLNFHG SNILNPILHA KQELHEMSNT DQANIERKIT 240 TTSQQHEMGS YLMQSNSGTA SSASHGGQIP GTFWMVSNPN SNQVMTGDPI WTFPASVGTN 300 NTTMHRGSIP SSTNSAGLHF MNFPTPLALL PSQQLGMGLG MGTGSTGGGG GGGGGTAEGH 360 LGMLAAFNAY RSLHGTGGDS DHQTSGIHSQ HHHGGDDQQH ETSSRHS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDGESNIRWP NFPLQLLEKK EEAAEDLSSS RSGYPSVAAE TSTIGSNSSS HLQTTADHQA  60
LVKKPAPKRA STKDRHTKVD GRGRRIRMPA ACAARVFQLT KELGHKSDGE TIEWLLQQAE  120
PSVIAATGTG TIPANFTSLN ISLRSSGSTI SAPSQLMRNT YFNPNFVTPQ LRMRSEWERN  180
IDESSQRQIC FAGGGYSSES SSSNLLNFHG SNILNPILHA KQELHEMSNT DQANIERKIT  240
TTSQQHEMGS YLMQSNSGTA SSASHGGQIP GTFWMVSNPN SNQVMTGDPI WTFPASVGTN  300
NTTMHRGSIP SSTNSAGLHF MNFPTPLALL PSQQLGMGLG MGTGSTGGGG GGGGGTAEGH  360
LGMLAAFNAY RSLHGTGGDS DHQTSGIHSQ HHHGGDDQQH ETSSRHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	8e-62	TCP family protein