PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13336.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 438aa MW: 48326.5 Da PI: 5.6545

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13336.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.1	1.2e-14	198	257	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++ ++g+++A+++d ++ g ++ k++ lg ++ +e+Aa+a++ ++k++g OVA13336.1 198 SKYHGVTRHFWTGKFEAHLWDnSYIrEGhrRKgKQVFLGQYDNEEKAARAYDLVALKYWG 257 89*****************666676686336***********************98 PP
2	AP2	39.7	1.2e-12	301	351	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++ +grW A+I p g r+ +lg+f ++eeAaka++ a k++g OVA13336.1 301 SIYRGVTRHG-DGRWQARISGiP---G-RRGLHLGTFSSEEEAAKAYDIASIKYRG 351 57***999.9**76666...4.7**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MASSTPANEQ PSDSDISTKV QYSIEEKHES SFPDSAQSTN PSVLVNGQAP GCEISLGDQA 60 VDENCDSAPS VDTQLKPLPS SANEQTPGVG SQVTVEEKCG VSHSDNSNTE LKSLSVSELA 120 NGKIPESETS LRTKSSSEEN SDSQNVQSVL VSGTAMCLNL DSVKDLVCHN TEKKIEEAIP 180 LAVSAPKKLI EKDDHRTSKY HGVTRHFWTG KFEAHLWDNS YIREGHRRKG KQVFLGQYDN 240 EEKAARAYDL VALKYWGPNA STKLNFPISS YEKELEGMNH MSREEFVMFI RRKSCFKKGS 300 SIYRGVTRHG DGRWQARISG IPGRRGLHLG TFSSEEEAAK AYDIASIKYR GMKAFTNFDV 360 SNYSEVDLKE SEGEPEPKRL KKKVELTAST IVVAKSDPQP DVIAQTDITV RQNASWAWDT 420 QELLTLGSGN NVHLEGES

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MASSTPANEQ PSDSDISTKV QYSIEEKHES SFPDSAQSTN PSVLVNGQAP GCEISLGDQA  60
VDENCDSAPS VDTQLKPLPS SANEQTPGVG SQVTVEEKCG VSHSDNSNTE LKSLSVSELA  120
NGKIPESETS LRTKSSSEEN SDSQNVQSVL VSGTAMCLNL DSVKDLVCHN TEKKIEEAIP  180
LAVSAPKKLI EKDDHRTSKY HGVTRHFWTG KFEAHLWDNS YIREGHRRKG KQVFLGQYDN  240
EEKAARAYDL VALKYWGPNA STKLNFPISS YEKELEGMNH MSREEFVMFI RRKSCFKKGS  300
SIYRGVTRHG DGRWQARISG IPGRRGLHLG TFSSEEEAAK AYDIASIKYR GMKAFTNFDV  360
SNYSEVDLKE SEGEPEPKRL KKKVELTAST IVVAKSDPQP DVIAQTDITV RQNASWAWDT  420
QELLTLGSGN NVHLEGES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	7e-80	AP2 family protein